Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02577 ATGTCTTCAACTCATCACCTTCATTTCACAATCATTCTCGTTCTATTCTTCTCTACCAAGTTGCCATGTTTTGTAAACACTTCCATTCCACAACAGCTTCTGAAGGGATTCTCATCAATCCCACTCTCATCATCCAAGTCGTTTCAACCACTTCTAATTGACCCCACAGCCAACTTCTCTCTTGGATTCCTCCGCCATAACCAATACGACCTCAAGCTAGCTGTCGTTCACACCCCTTCATCCCAACCATTATGGATCGCCAACCCAACACGCTCCGCATCTTGGGCCGACACCACACGCATCTTCTTCAACGGCAGTCTTGTTCTCTGGGACCCACAGAAAGGAGTAACGTGGTCAACCGCCACATATGGTGAGCGCGTGGTGCTCCTCAACACCTCCAACTTGCAAGTGCAAAAGCAAAACAAAGCAACTCCACTCTGGGAAAGTTTTCATTTTCCCACAAATACCCTCGTTCAGGATCAGAACTTCACATCCAACATGTCTTTGCTATCATCCAACGCTCTCTATTCGTTACGATTAGGTGATACTTTCATGGGCTTATACGCAAATTACGGCGAAGAAAAAGGAAGTTTGTTATCCAAACGGTTATTATACTGGAAACACACTGCACTTGAAGCAAAAGCTACTATAGTCGAAAGTGAGGGACCCATTTACGCAAGAGTAAGCACCAAGGGTTATATCGGAATGTACCAAACAAGTTCCAAACCCGTGGATGTTCAGAAATTCAACAGTTTCCAACAAACGTCGTCGTTTCTTTTGCTCCGGTTAGAACTGGACGGGAATCTAAAAGGATATTATTGGGATTCAACAAAGTCTAGCTGGCTACTTAACTATCAAGCTATTACCGAAACTTGTGAGCTTCCTAACCCCTGCGGTTCGTACGGTTTGTGTACGCCGGGTCAGTCTAGTTGTTCGTGTTTGGATAACCGAGCCCGGTTCGAACCGGGTGGGTGTTTCATTCAAAATGGAAATGAAGATGGAGAATTGTGTGCTGGGGATGGGATTGCTGGAGAAAACGGTTACCGGATTCTGAGAAGAAACGGCGTTGAACCACCGCATAAGGCGTTACTGGAGCAAGTAACAACGTCGTCTTTGGAGGAATGTGAGGGATTATGTGAGAAAAATTGTAGTTGTTGGGGAGCGTTGTATAGTAATGGAACCGGGTTTTGTTATGTTTTGGATTATCCAATTGGAACGATGTTGGGCACAGGGGATGAGTCAAAGGTGGGTTATTTTAAGGTGAGGAAAGGTGCACGGAAAAGGAATAgggttggggttatatttggaattgtggttggggttATATTTGGAACTGTCGTTGTGGGGGTTGGAATTTGTGCGGTGagatggaaaaggatgaaaaaggtgaatgggaaggaggaagaggaggaggaggagAATTGGGCCGGGCCGGGCCCGTATAAGAATCTTGGATCCGCAAGTTTTAGAAGCATTGAGATGTGTAGTGGTAGTGGTGTGCAATAA 1506 0.4276 MSSTHHLHFTIILVLFFSTKLPCFVNTSIPQQLLKGFSSIPLSSSKSFQPLLIDPTANFSLGFLRHNQYDLKLAVVHTPSSQPLWIANPTRSASWADTTRIFFNGSLVLWDPQKGVTWSTATYGERVVLLNTSNLQVQKQNKATPLWESFHFPTNTLVQDQNFTSNMSLLSSNALYSLRLGDTFMGLYANYGEEKGSLLSKRLLYWKHTALEAKATIVESEGPIYARVSTKGYIGMYQTSSKPVDVQKFNSFQQTSSFLLLRLELDGNLKGYYWDSTKSSWLLNYQAITETCELPNPCGSYGLCTPGQSSCSCLDNRARFEPGGCFIQNGNEDGELCAGDGIAGENGYRILRRNGVEPPHKALLEQVTTSSLEECEGLCEKNCSCWGALYSNGTGFCYVLDYPIGTMLGTGDESKVGYFKVRKGARKRNRVGVIFGIVVGVIFGTVVVGVGICAVRWKRMKKVNGKEEEEEEENWAGPGPYKNLGSASFRSIEMCSGSGVQ 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02577 501 SUPERFAMILY alpha-D-mannose-specific plant lectins 83 281 IPR036426 -
Car03g02577 501 PANTHER OS11G0149900 PROTEIN 42 486 - -
Car03g02577 501 Pfam S-locus glycoprotein domain 251 315 IPR000858 GO:0048544
Car03g02577 501 PIRSF SLG 1 434 IPR035446 -
Car03g02577 501 ProSiteProfiles PAN/Apple domain profile. 337 423 IPR003609 -
Car03g02577 501 Gene3D - 52 221 - -
Car03g02577 501 PANTHER - 42 486 - -
Car03g02577 501 Pfam D-mannose binding lectin 84 177 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02577 Car-Chr3 71609656 71611755 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02577 - - cam:101498584 998.038
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02577 03 71609656 71611755 Car03g02577 03 71609656 71611755 ECH