Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02565 ATGAGCTTCTTTCCTGCTTTGACAAAGATCGTTGGTACTCTTGGACCTAAATCTCGCTCAGTCGATGTTATTTCTTCTTGTCTCAAAGCTGGAATGTCTGTGGCTCGTTTTGATTTCTCTTGGGGTGACTCTGAATATCACCAACAGACTTTGGAGAATTTGAAGGAGTCTATTAAGAGTACTAAGAAGCTCTGTGCTGTTATGTTGGACACAGTGGGTGCTGAGATGCAGGTTGTTAACAAAAACGAGACATCAATTTCGCTTCAGGCTGATAGTCAGGTTGTTTTAACTCCTGATCAGGGACAAGAAGCTTCTTCAGAGATATTGCCTATCAATTTTGATGGATTGGCCAAGTCAGTGAAGAAGGGAGACACCATTTTCGTTGGTCAATACTTGTTCACAGGAAGTGAAACTACTTCTGTATGGCTAGAGGTAGCTGAAATTTCAGGGCAGGATGTTGTTTGTACTATAAAAAATTCGGCAACGTTGGCTGGGGCATTGTTTACCTTGCATGCCTCTCAAATTCATATTGATTTGCCTACCCTCACTGAGAAAGACAAAGAGGTTATTAGCACCTGGGGAGTAAAAAACAAAATTGACTTTCTATCATTGTCATATACTAGGCATGCTGAAGATGTTCGCGAGGCACGTGAATTCCTTTCGAAATTAGGTGATCTCAGTCAGACTCAAATTTTTGCAAAGATTGAAAATGTTGAGGGATTGACCCATTTTGATGAGATTCTACAAGAAGCAGATGGCATTATTCTTTCCCGTGGGAATTTGGGTATTGATCTTCCACCAGAGAAGGTATTTTATTTTCAAAAGTCTGCCCTTTACAAGTGTAATATGGCTGGGAAGCCTGCTGTGCTCACACGTGTTGTTGATAGCATGACCGACAACTTAAGGCCAACTCGTGCGGAAGCTACGGATGTCGCCAATGCTGTTTTAGATGGAAGTGATGCAATACTTCTGGGTGCGGAGACTTTACGTGGGTTATACCCTGTTGAGACTATTTCTACAGTTGGCAAGATTTGTTCAGAAGCTGAGAAAGTTTTCAATCAAGACCTTTATTTTAAGAAGACAGTCAAATTTGTGGGAGAACCCATGACCCATTTAGAATCCATTGCATCCTCTGCGGTAAGAGCAGCTATTAAGGTGAAGGCCTCAGTTATCATTTGCTTCACTTCATCTGGACGGGCTGCAAGATTGATAGCAAAGTATAGGCCAACGATGCCGGTTCTCTCTGTTGTGATACCCAGACTCAAGACAAATCAGCTAAAATGGAGCTTTAGTGGAGCTTTTGAGGCAAGGCAATCACTTATTGTAAGAGGTCTTTTTCCCATGCTTGCTGATCCTCGACATCCTGCTGAATCAACAAGTGCGAGTAACGAGTCTATTCTCAAGGTAGCACTTGATCATGGAAAAGCATCAGGAGTTATAAAGCCCCATGATAGAGTTGTTATTTGTCAGAAAGTTGGTGATGCTTCTGTGGTTAAGATTATCGAGCTCGAAGATTAA 1518 0.419 MSFFPALTKIVGTLGPKSRSVDVISSCLKAGMSVARFDFSWGDSEYHQQTLENLKESIKSTKKLCAVMLDTVGAEMQVVNKNETSISLQADSQVVLTPDQGQEASSEILPINFDGLAKSVKKGDTIFVGQYLFTGSETTSVWLEVAEISGQDVVCTIKNSATLAGALFTLHASQIHIDLPTLTEKDKEVISTWGVKNKIDFLSLSYTRHAEDVREAREFLSKLGDLSQTQIFAKIENVEGLTHFDEILQEADGIILSRGNLGIDLPPEKVFYFQKSALYKCNMAGKPAVLTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETISTVGKICSEAEKVFNQDLYFKKTVKFVGEPMTHLESIASSAVRAAIKVKASVIICFTSSGRAARLIAKYRPTMPVLSVVIPRLKTNQLKWSFSGAFEARQSLIVRGLFPMLADPRHPAESTSASNESILKVALDHGKASGVIKPHDRVVICQKVGDASVVKIIELED 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02565 505 Gene3D - 349 491 IPR036918 -
Car03g02565 505 Gene3D - 74 180 IPR015806 GO:0004743|GO:0006096
Car03g02565 505 TIGRFAM pyruv_kin: pyruvate kinase 8 494 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car03g02565 505 Pfam Pyruvate kinase, barrel domain 8 353 IPR015793 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car03g02565 505 Gene3D - 8 348 IPR040442 -
Car03g02565 505 SUPERFAMILY PK C-terminal domain-like 336 498 IPR036918 -
Car03g02565 505 Pfam Pyruvate kinase, alpha/beta domain 373 500 IPR015795 -
Car03g02565 505 SUPERFAMILY Phosphoenolpyruvate/pyruvate domain 7 353 IPR015813 GO:0003824
Car03g02565 505 PANTHER PYRUVATE KINASE 2 505 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car03g02565 505 PRINTS Pyruvate kinase family signature 307 325 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car03g02565 505 PRINTS Pyruvate kinase family signature 326 342 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car03g02565 505 PRINTS Pyruvate kinase family signature 231 257 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car03g02565 505 PRINTS Pyruvate kinase family signature 199 213 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car03g02565 505 PRINTS Pyruvate kinase family signature 258 282 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car03g02565 505 PRINTS Pyruvate kinase family signature 63 79 IPR001697 GO:0000287|GO:0004743|GO:0006096|GO:0030955
Car03g02565 505 PANTHER PYRUVATE KINASE 2 505 - -
Car03g02565 505 SUPERFAMILY PK beta-barrel domain-like 81 164 IPR011037 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02565 Car-Chr3 71502244 71512927 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02565 K00873 - gmx:100807864 933.324
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02565 03 71502244 71512927 Car03g02565 03 71502244 71512927 ECH
Car03g02565 03 71502244 71512927 Car04g01965 04 23334266 23340785 PCT