Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02563 ATGGGTGCCTCGCTGTCGAACCTTGGATCCAACGGTTCGACCATCGTTCCAAGCCTCGGCGACATCCCGGAGAATTGCGTCGCTCGCGTTTTTCTTCACCTTACTCCGCCCGAGATTTGTAACTTAGCTCGTCTTAATCGCGCTTTTCGCGGCGCCGCTTCTGCTGATTACGTTTGGCAATCTAAGTTACCTTCTAACTACCAACACCTTCTCCGTTTAATGCCTACGGAACGTTGCCAGAATCTATCTAAGAAAGACATTTTCGCTATTCTATCGAGGCCGTTACCGTTTGATGACGGAAATAAGCAAGTGTGGTTGGATAGGGTTACTGGTAGGGTTTGCATGTCGATTTCGGCCAAAGCTTTGTCGATTACTGGAATTGATGATCGTAGATACTGGACTTGGATTCCAACTGAAGAATCTAGGTTCACTGTTGTAGCATATCTCCAGCAAATATGGTGGTTTGAAGTGGATGGGGAGGACGACTTTCCATTTCCTGCTGATAATTATACTCTCTCCTTTAGGCTTCATCTTGGCAAATTTTCCAAAAGGCTCGGTCGGCGCATATGCAATTATGAACAGACCCATGGTTGGGATATAAAGCCAGTGATATTTGAGTTGTCAACTTCCGATGGTCAACAAGCATCATCCGAGTGCTGCTTGGATGAAACTGAGCATGATGGGACATACAGCAATCATAAGCGAGGATGTTGGGTAGATTACAAGTTTTGTCAGATGAGATTGATAAAGAATGAAGAAAACAAGCTTCGCCGAAACTTCATTTGGATGCTCCATTTCTTCTGA 804 0.4515 MGASLSNLGSNGSTIVPSLGDIPENCVARVFLHLTPPEICNLARLNRAFRGAASADYVWQSKLPSNYQHLLRLMPTERCQNLSKKDIFAILSRPLPFDDGNKQVWLDRVTGRVCMSISAKALSITGIDDRRYWTWIPTEESRFTVVAYLQQIWWFEVDGEDDFPFPADNYTLSFRLHLGKFSKRLGRRICNYEQTHGWDIKPVIFELSTSDGQQASSECCLDETEHDGTYSNHKRGCWVDYKFCQMRLIKNEENKLRRNFIWMLHFF 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02563 267 ProSiteProfiles F-box domain profile. 16 62 IPR001810 GO:0005515
Car03g02563 267 SUPERFAMILY F-box domain 17 70 IPR036047 GO:0005515
Car03g02563 267 Pfam Phloem protein 2 113 248 IPR025886 -
Car03g02563 267 PANTHER F-BOX PROTEIN PP2-A15 1 248 - -
Car03g02563 267 PANTHER F-BOX DOMAIN, PHLOEM PROTEIN 2-LIKE PROTEIN-RELATED 1 248 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02563 Car-Chr3 71490135 71494000 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02563 - - gmx:100807328 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02563 03 71490135 71494000 Car03g02563 03 71490135 71494000 ECH