Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02558 ATGGCTTCAGAATCATATTCATATTCATCTTCATCCATGAAACTCTTGTTGTTTATGGTTCCTCTCATAATTGTTGCTGGACTTGTATCTGTATTAGGTCCTAATCCTTCTAATTGGGTTCTTATTCCTAATCAACCTCTCTTATGGAGTTCTGTTACTACATCTTCATCAGAAAGTGGTTCTCTTATGGAAAAAGTTCAAGCTGTTTCATTTGATTTTCATAATAATAACAAGGAAGTGAAAGCTATATCTGATGATGACACTTTTTTCAATCAATCTTCTACTCCACCACTTTCTATTCAAACACTTCAAAAATTGAACAAAGATGAAGAAAGTGACAATGCCTCTCAAATCTGGACCAATACAACTTCTATGAATGAATCTTACTATATTCCTCTAGAGAAACCAAACCTTCCAAGAAAGTTCAGCATCTTAGACAGAACAGAAGCCGGTCTACTACAAGCTCGAGCCGCAATACGGAAAGCAAGAAATGGGAATCAAACACAAGACATAGACTATGTTCCAATAGGACCAATGTATTACAATCCTAATGCATTTCACAGGAGTTATTTAGAAATGGAGAAACAGTTTAAAGTATTTGTCTACGAAGAAGGGGAGCCTCCAGTTTTCCACAATGGACCTTGCAAAAGTATATACTCCATGGAAGGAAATTTCATCCACACAATTGAGATGAATGACCAATTCCGAACAAGAGACCCCGATAAGGCGCACGTATTTTTCCTTCCTTTTAGTGTAGCAATGATGGTCCAATTTGTCTATGTTCGTGACTCTCATGATTTTAGCCCCATAAAGAAAACCGTCGCCGATTATATCAATGTCATTTCCGAAAGATACCCCTTTTGGAACCGAAGTCTCGGAGCTGATCATTTCATGCTTTCTTGCCATGATTGGGGGCCCGAGGTATCAAATTCAGTTCCAAACTTGTACAAGAATTCGATTCGTGCACTATGCAATGCCAACACCTCCGAGGGATTCAAACCAGCAAAGGATGTATCTTTTCCAGAAATCAATCTTCAAACCGGTACAATACATGGTTTTGTAGGCGGGCCATCTCCATCCAAGCGATCAGTTTTAGCTTTCTTTGCCGGCGGGCTTCACGGGCCCATTAGGCCCATTCTACTTGATCATTGGGAAAACAAAGATGAAGACATTCAAGTTCACAAGTACCTTCCAAAGGGTGTGTCTTACTATGACATGTTAAGAAAAAGCAAGTTTTGTCTTTGTCCTAGTGGATACGAGGTAGCAAGTCCAAGAGTGGTGGAAGCAATCTACACAGGTTGTGTTCCAGTGCTGATTTCAGATCATTATGTTCCTCCATTCAGTGATGTTTTGAATTGGAAATCGTTTTCTGTTGAGGTTTCAGTTGATGATATACCTAACTTGAAGAAAATTCTGTTGAGTATTTCACCCAGACAGTATATAAGAATGCAGAGAAGAGTAGGACAAGTTAGGAGACATTTTGAGGTACATTCTCCACCTAAGAGATTTGACGTGTTTCATATGATCCTTCATTCTATTTGGCTTAGAAGATTAAACTTCAGAGTCCATGATGACCAATAA 1581 0.389 MASESYSYSSSSMKLLLFMVPLIIVAGLVSVLGPNPSNWVLIPNQPLLWSSVTTSSSESGSLMEKVQAVSFDFHNNNKEVKAISDDDTFFNQSSTPPLSIQTLQKLNKDEESDNASQIWTNTTSMNESYYIPLEKPNLPRKFSILDRTEAGLLQARAAIRKARNGNQTQDIDYVPIGPMYYNPNAFHRSYLEMEKQFKVFVYEEGEPPVFHNGPCKSIYSMEGNFIHTIEMNDQFRTRDPDKAHVFFLPFSVAMMVQFVYVRDSHDFSPIKKTVADYINVISERYPFWNRSLGADHFMLSCHDWGPEVSNSVPNLYKNSIRALCNANTSEGFKPAKDVSFPEINLQTGTIHGFVGGPSPSKRSVLAFFAGGLHGPIRPILLDHWENKDEDIQVHKYLPKGVSYYDMLRKSKFCLCPSGYEVASPRVVEAIYTGCVPVLISDHYVPPFSDVLNWKSFSVEVSVDDIPNLKKILLSISPRQYIRMQRRVGQVRRHFEVHSPPKRFDVFHMILHSIWLRRLNFRVHDDQ 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02558 526 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 211 484 - -
Car03g02558 526 Pfam Exostosin family 194 473 IPR040911 -
Car03g02558 526 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 92 523 IPR004263 GO:0006486|GO:0016757
Car03g02558 526 PANTHER EXOSTOSIN FAMILY PROTEIN 92 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02558 Car-Chr3 71451520 71455243 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02558 - - gmx:100806278 849.351
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02558 03 71451520 71455243 Car03g02558 03 71451520 71455243 ECH
Car03g02558 03 71451520 71455243 Car04g01959 04 23271220 23278805 PCT