Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02544 ATGGAAGCCATCCTACAAAGTTTAGGAATTATGGAATCCAACCAAGAAGAGAAGGACAAAAATAATGAAAATAATAATATTATGAAAGAATTGGACAATGGGAGCCAAATGTTGGTATCAAATTTCTACCCACAATGCCCTGAACCAAACCTAACCTTAGGAATGCACCCTCATTCTGATTATGGGTTCCTCACACTTCTCCTTCAAGACGAGGTGGAAGGTTTGCAAATCCAATTCAAAGACAAATGGGTCACTGTTCAACCTATTCCCAATGCTTTTGTTGTCAATGTTGGTGATCATTTAGAGATATATAGCAACGGAAAATACAAAAGTGTTTTACACAGAGTTTTGGTGAATGAAGCTAGAAGTAGAGTATCGGTGGCGACACTTTATAGCCTTCCTTTTAACTGCACAGTGAAACCATCACCAAAACTTATTGACGAAGCGAATCCAAAGCGTTACATGGACACAGATTTTGGTAGTTTTTTAGCGTACGTGTCCACTAGAGAAACCAAGAAAAAGGATTTCCTAGAGTCTAGGAAATTGATACACACATAA 558 0.3799 MEAILQSLGIMESNQEEKDKNNENNNIMKELDNGSQMLVSNFYPQCPEPNLTLGMHPHSDYGFLTLLLQDEVEGLQIQFKDKWVTVQPIPNAFVVNVGDHLEIYSNGKYKSVLHRVLVNEARSRVSVATLYSLPFNCTVKPSPKLIDEANPKRYMDTDFGSFLAYVSTRETKKKDFLESRKLIHT 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02544 185 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 33 133 IPR005123 -
Car03g02544 185 PRINTS Isopenicillin N synthase signature 58 79 - -
Car03g02544 185 PRINTS Isopenicillin N synthase signature 93 119 - -
Car03g02544 185 Coils Coil 10 30 - -
Car03g02544 185 MobiDBLite consensus disorder prediction 1 22 - -
Car03g02544 185 PANTHER LEUCOANTHOCYANIDIN DIOXYGENASE-LIKE PROTEIN 1 182 - -
Car03g02544 185 Gene3D - 1 174 IPR027443 -
Car03g02544 185 SUPERFAMILY Clavaminate synthase-like 25 169 - -
Car03g02544 185 Pfam 2OG-Fe(II) oxygenase superfamily 36 130 IPR044861 -
Car03g02544 185 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 1 182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02544 Car-Chr3 71346301 71351608 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02544 25 157 Glycosyltransferase AT5G59530 48.175 8.50e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02544 - - cam:101511637 350.903
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02544 03 71346301 71351608 Car03g02544 03 71346301 71351608 ECH
Car03g02544 03 71346301 71351608 Car04g01952 04 22887424 22892209 PCT