Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02541 ATGGAGTCAGAAGCACCTAAACATGTTCACTTTGTGTTATTTCCACTTATGTCCCCAGGACACATGCTTCCAATGatagacatagcaaaaacattaacacaacacaaaaacatCATCGTCACCATTGTCACTACCCCACACAACGCTTCTCGTTTCTCACATATTTTCTCTCAAAATCTCCGATTACTTCAACTTCAATTCCCATCTCAAGATCATGGCTTTCCACAAGGTTGTGAGAATTTCGACATGCTTCCTTCAATGTCTATGGCTTACACTTTCTTTACCGTTTCAAATACTCTTCTACAACAACAAGCACAACAAGCTTTTCAAAATTTAACACCAAAACCAAATTGCATTATCTCTGATTTTAGTTTTCCCTANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCTACACTTCTCAAATCGCTGCTAAATTCAACATTCCAAGAATTTCCTTTTATGGGGTTAGTTGTTTTTGTCTTGTTTGGCACAAAAATTTGTTAATTTCTAATGTTATGGAAAACATAGAAAAAGATTCTGAGTCTTTTTTTATACCTGAAATTCCTCACAAAATTGAGATCACAAAAGCACAGTATCCATCATCAAATGATGGAAATTGGAAGGAATTTGTTGGTAAAATGGTTGAAGCTGAAATGGGTTCTTATGGTGTTGTTGTGAATTCTTTTGAGGAATTGGAACAAGAATATGTAAGTGATTATAAGAAAAGTATGAATGATAAAGTTTGGTGTGTTGGTCCTGTTTCACTTAGAAATAATAGTAATAATTTAGATATGGCTAAGAGAGGAAACAATAACAATAAGGATTCAAATTCAATTGATTGTTTAAAGTGGCTTGATTTGCAAAAGCCAAATTCTGTTATTTATGTATGTTTTGGAAGTATATGTAATTTAAATGCTTTGCAATTCATAGAGCTTGGTATGGGATTAGAAGCATGTGAAAAACCATTTATTTGGGTTATTAGAGAAAGGAATCAAACAGAAGAGTTGAATAAATGGTTCGACGAATCGGGTTTTGAGGAAAGGATTAAAGGAAAAGGGATTTTGATAAAAGGTTGGGCTCCTCAAGTATTGATACTATCACATTGTTCAGTTGGAGGTTTTTTGACACATTGTGGTTGGAACTCGACATTAGAAGCGATATGTAGTGGTGTGCCGATGATTACGTGGCCGTTATTTGGAGATCAGTTTTTTAATGAAAGATTTGTTGTGGAAATATTGAGAGTCGGAGTGATGGTTGGAGTGGTGAGTCCTGTAAATTGGGGAGAGGAAGAGAATGTTGGTGTGTTGGTGAAGAAAGAACATGTTTTGAGAGCTATAGAGAAGTTGATGGATGAAGGGAATTATGAAAGTGAAGAGAGGAGAAAAAGGGCTAAAGAGCTTGCAAAGATGGCTAAGAAAAGTGTAGAAGAAGGAGGATCTTCTCACTTTAATGTCAATCTATTAATCCAAGATATCCTTCAACACTCCAACAAAGGAGATTGA 1551 0.3282 MESEAPKHVHFVLFPLMSPGHMLPMIDIAKTLTQHKNIIVTIVTTPHNASRFSHIFSQNLRLLQLQFPSQDHGFPQGCENFDMLPSMSMAYTFFTVSNTLLQQQAQQAFQNLTPKPNCIISDFSFPXXXXXXXXXXXXXXXXXXXXXXXXXXXYTSQIAAKFNIPRISFYGVSCFCLVWHKNLLISNVMENIEKDSESFFIPEIPHKIEITKAQYPSSNDGNWKEFVGKMVEAEMGSYGVVVNSFEELEQEYVSDYKKSMNDKVWCVGPVSLRNNSNNLDMAKRGNNNNKDSNSIDCLKWLDLQKPNSVIYVCFGSICNLNALQFIELGMGLEACEKPFIWVIRERNQTEELNKWFDESGFEERIKGKGILIKGWAPQVLILSHCSVGGFLTHCGWNSTLEAICSGVPMITWPLFGDQFFNERFVVEILRVGVMVGVVSPVNWGEEENVGVLVKKEHVLRAIEKLMDEGNYESEERRKRAKELAKMAKKSVEEGGSSHFNVNLLIQDILQHSNKGD 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02541 516 Gene3D Glycogen Phosphorylase B; 155 501 - -
Car03g02541 516 PANTHER GLYCOSYLTRANSFERASE 153 514 - -
Car03g02541 516 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 154 513 - -
Car03g02541 516 Gene3D Glycogen Phosphorylase B; 7 130 - -
Car03g02541 516 ProSitePatterns UDP-glycosyltransferases signature. 375 418 IPR035595 -
Car03g02541 516 PANTHER GLYCOSYLTRANSFERASE 8 127 - -
Car03g02541 516 PANTHER GLYCOSYLTRANSFERASE 8 127 - -
Car03g02541 516 PANTHER GLYCOSYLTRANSFERASE 153 514 - -
Car03g02541 516 CDD GT1_Gtf-like 10 500 IPR002213 GO:0008194
Car03g02541 516 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 227 425 IPR002213 GO:0008194
Car03g02541 516 Gene3D Glycogen Phosphorylase B; 286 489 - -
Car03g02541 516 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 10 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02541 Car-Chr3 71320954 71322504 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02541 1 510 Glycosyltransferase AT2G36800 48.952 1.43e-176 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02541 K13496 - gmx:112997714 666.381
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02541 03 71320954 71322504 Car03g02541 03 71320954 71322504 ECH