Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02538 ATGGACACAACAACAAAATGCTACCACAATCTCCATTTCATATTCATCCCTTTAATGGCCCCTGGCCATCTCCTTCCAATGGTTGATATGGCAAAATTATTAGCAAGACGCAAAGTTAAGGTTACAATTATCACCACACCCCTCAATTCCATTCATTTTCAATCAACCATAAACAGAGAAATTCTATTAGGATCACAAATCCAAATTCTCAACATTAAATTCCCAAATCAAGAATCTGGAATCCCAGAAGGTTGTGAAAGTGTTGACACTTTACCTTCAATGGATTTAATGTCCAATTTTTATATTGCTTTATGTAAGTTGCATCAACCACTAGAAAATATTTTTCAAACTTTAAGTCCAATTCCAAGTTGTGTAATTTCAGATAAACACATTTCATGTGTAGCTGATATAGCACAAAAGTTCGATGTTCCGCGAATTATATTCGATGGGACTAATTGTTTTCATCTATTGTGCAATCATAATTTACATAATTTTAATAAAAATATTCCTAATGAAGGAAAATTCGTTGTTCCAAATATGCCAGATATAATTGAATTGCAAAAATGTCAACTTCCTGGGTTATTTAATCCAGGAAGAAACAAAAAATTAAATAGTTTTCGTGAGAGAATAAGAGAAATAGATGAAAAATGTTCATATGGTGTAGTGGTAAATAGTTTTGAAGAATTGGAAGAAAATTATGTTAAAGAGTATCAAAGAGTGAGTGGTTATAAAGTTTGGTGTGTTGGTCCTGTTTCATTATGTAACAATGATGAGTTGGATAAAGTTGAAAGAGGGAAGAGAATTAATTCAAATAATGAAAGTGAATATGAAATTGTTAAGTGGCTTGATTCATGGCCTTCAAATTCTGTGATTTATGTTTGTCTTGGTAGTTTAAACCGTGCAACACCTCAACAATTGAAAGAGGTTGGGTTAGGATTGGAAGCAACAAAAAGGCCATTTATTTGGGTTTTGAGGGGTGCATATGGAAAAGATGAAATTGAGAAATGGCTATATGAAGAAAGGTTTGAGGAAAGGGTAAAAGGGAGAGGTTTTTTTATAAAGGGTTGGGCCCCACAAGTTTTGATATTGTCACACAAAGCAATAGGAGTTTTTTTGACACATTGTGGTTGGAATTCAACATTGGAAGGGATTTGTGGTGGGGTGCCTTTAGTAACTTTTCCTTTGTTTGCTGAGCAATTTTATAATGAGAAAGTTGTGGTGCAAGTTGTGAAGAATGGTGTGAGTGTGGGAGCTGAAAGTGTTGTGCACTTAGGAGAGGAAGAAAATTATTGTGTTGTGGTTAAGAAGGAAAATGTTAGAGATGCTATAGAGAAGGTTATGGGGGAGGGTGAAGAAAAGGAAAAGATTATGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAAAAATATGGTGACATGGCAAGGAAAGCATTAG 1548 0.312 MDTTTKCYHNLHFIFIPLMAPGHLLPMVDMAKLLARRKVKVTIITTPLNSIHFQSTINREILLGSQIQILNIKFPNQESGIPEGCESVDTLPSMDLMSNFYIALCKLHQPLENIFQTLSPIPSCVISDKHISCVADIAQKFDVPRIIFDGTNCFHLLCNHNLHNFNKNIPNEGKFVVPNMPDIIELQKCQLPGLFNPGRNKKLNSFRERIREIDEKCSYGVVVNSFEELEENYVKEYQRVSGYKVWCVGPVSLCNNDELDKVERGKRINSNNESEYEIVKWLDSWPSNSVIYVCLGSLNRATPQQLKEVGLGLEATKRPFIWVLRGAYGKDEIEKWLYEERFEERVKGRGFFIKGWAPQVLILSHKAIGVFLTHCGWNSTLEGICGGVPLVTFPLFAEQFYNEKVVVQVVKNGVSVGAESVVHLGEEENYCVVVKKENVRDAIEKVMGEGEEKEKIMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMVTWQGKH 515
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02538 515 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 11 457 - -
Car03g02538 515 PANTHER GLYCOSYLTRANSFERASE 8 456 - -
Car03g02538 515 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 276 457 IPR002213 GO:0008194
Car03g02538 515 PANTHER GLYCOSYLTRANSFERASE 8 456 - -
Car03g02538 515 Gene3D Glycogen Phosphorylase B; 9 278 - -
Car03g02538 515 Coils Coil 506 507 - -
Car03g02538 515 CDD GT1_Gtf-like 11 454 IPR002213 GO:0008194
Car03g02538 515 Coils Coil 457 457 - -
Car03g02538 515 Gene3D Glycogen Phosphorylase B; 279 461 - -
Car03g02538 515 ProSitePatterns UDP-glycosyltransferases signature. 356 399 IPR035595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02538 Car-Chr3 71307666 71309264 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02538 2 455 Glycosyltransferase AT2G36780 47.391 1.31e-149 436
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02538 - K13496 gmx:100820150 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02538 03 71307666 71309264 Car03g02538 03 71307666 71309264 ECH