Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02531 ATGGTGAAGGCCTACCTCCGATACGAACCGGCGGCGTCTTTCGGCGTAATAGCATCAGTTGATTCCAACGTTACATACGACAGCAGCGGCAAACACCTACTCTCTCCGGCTCTCGAGAAAATCGGCGTTTGGAACGTGCGGCAAGGCATCTGCACTAAAACCCTAACTCCTACCGTTCCTTGTCGCGGTCCTTCTCTCGCCGTCACTTCCATCGCTGCCTCTCCTTCTGTATTGGTTGCTGGTGGTTACGGTGATGGTAGCATAAGGATTTGGGATTGTGAAAAAGGAAGTTGTGAGACTACTTTGAATGGACACAAAGGAGCTGTAACTGCTCTTCGTTATAACAAGGCTGGTTCTTTACTTGCTTCTGGTAGTAAAGATAATGATGTTATTTTGTGGGATGTTGTTGGAGAGACTGGACTCTTTCGCCTTCGCGGTCATCGCGATCAGGTGACTGATGTTATTTTTGTGGGTTCCGGTAAAAAACTAGTTAGTTCTTCTAAAGACAAGTTTTTGAGAGTTTGGGATATTGATACCCAGCACTGTATGCAAATTGTTGGGGGACATCATAGTGAAATATGGACATTGGATGTTGATCCCAGTGAAAGGTATTTGGTAACCGGTTCTGCGGATAAGGAGCTCCGTTTTTATGCAATCAAGCAAGATTCTGTGGATGGGGAGTCTGTAAATAATGGGGGAGATTCTTCCATTCAAAATAAGTGGGAAGTTTTGACGCATTTTGGTGAGATTCAACGGCAGAGCAAAGATAGAGTTGCTACTGTCCAGTTCAACAAGTCTGGGAATCTGCTAGCTTGTCATGTTGCGGGAAAGATGGTAGAAATATTCCGTGTTTTGGATGATGCCGAAGCAAAGCGTAAAGCAAAGCGCAGGGTTAACCGCAAAAAAGAGAAGAAACACGGCAAAGAGGATACAGAGGGAACGGAAAATGGAGATGGGAGTAATGAGAATAAAGGAGATAATTCTACTGTGATTGATGGACCCATAGAAATAAGTAAAATGACAGTTACTGTGACTGATGTTTTTAAACTGTTGCATACTATTAGAGCTAGCAAAAAGATATGCTCCATTTCTTTCTGTCCAACCACTCCAAAGAATTCACTAGCAAGTTTAGCATTATCCTTAAACAATAATCTAATTGAGTTTTACTCCATTGAAAGTGGTGAAACCAAAAAAACACTTGCCATTGATCTACAAGGGCATCGTTCTGATGTTAGAAGTGTCACACTTAGTTCAGACAACACTTTTTTGTTGTCAACCAGTCACAATGCAGTAAAGATTTGGAACCCAACCACTGGTTCTTGCCTAAGGACTATTGATTCTGGATATGGACTGTGCAGTTTAATTCTCCCGACTAACAAGTATGGACTTGTCGGAACTAAAGATGGAACCTTAGAAATTATTGACATTGGAAGTGGTACTCGTGCTGAAGTAATTGAAGCTCATGGTGGCTCTCTCCGGACAATTGCTGCCCTGCCAGATAAACATGGCTTTGTCACAGGAAGTGCAGATCATGATGTAAAGTTTTGGGAGTACCAGACTAAGCAGAAACCTGGTCAAGCTACCAAGCAACTCACTGTGTCAAATGTCCGGACTATGAGAATGAATGATGATGTTCTTGTGGTTGCAATTAGCCCTGATGCCAAATATATTGCTGTTGCCCTGTTGGATAGTACTGTAAAGATTCACTTTGTAGACACTTTCAAATTCTTCCTTTCATTGTATGGCCACAAGCTGCCTGTTCTGTGTATGGATATCTCATCAGATGGAGATTTAATTGTGACTGGCTCCGCTGATAAAAATATAAAGATCTGGGGTTTGGATTTTGGTGACTGTCATAAATCCATTTTTGCGCATGGTGACAGTGTCATGGCAGTGCAATTTGTTCCCAAGACGCACTATGTGTTCAGTGTTGGAAAAGATCGCCTAGTAAAATATTGGGATGCTGATAAATTTGAGCTGCTGTTAACTCTTGAAGGACATCATGCAGATATTTGGTGTCTTGCAGTCAGTAATCGTGGTGATTTTTTTGTCACTGGATCTCATGATCGCTCAATCCGCCGCTGGGATCGTACTGAGGAGCAGTTTTTCATTGAGGAAGAAAAGGAGAAGAGGTTGGAGGAAATGTTTGATGCTGATCTTGACAATGCATTTGAAAACAAGTATGTACCGAAGGAAGAAATACCAGAGGAGGGAGCTGTGGCCGTAGCTGGGAAAAAAACCCAGGAAACCCTTACTGCTACTGACTTAATTATTGAGAGAATAGACATTGCAGAAGTTGAGAAAAAGCGCCTTGCTGAACATCAGGAGGAGGAGAAAAACAATAAAAACGCTGTTTTCCAGCCAAATATTCTCATGAATGGCCGTTCACCTTCTGATTATGTTCTAAGTGCATTTTCAGATGTTCAATCGAATGATTTGGAGCAAACCTTATTGGCTTTACCGTTTTCAGATGCTTTGAAGCTTTTGTCATACTTGAAGGAATGGACATCATATTCTGATAAGGTTGAGCTTGTTTGCCGGATAGGTACACTGCTGTTGCAGACACATTATAATCAGCTGCTTGCCACACCAGCTGCCAGACCTGTCTTAACTGCTTTCAGTGACATTTTTTATGAACGGGTCAAGGGTTGGAAAGATATCTTTGGTTTTAACCTTGCAGCCATGGATCATATACAGCAATTGATGGCTTCGAGATCAGATGCTCTATTCCGGGATGCAAGATCAAAATTGCTGGAGATACGGGCTCGACAATCCAAACGTTTACAAGACTGGTCAGATACTGGAGAAATGATTCTGAAGAAGAAAAAGAAGACATAG 2838 0.4218 MVKAYLRYEPAASFGVIASVDSNVTYDSSGKHLLSPALEKIGVWNVRQGICTKTLTPTVPCRGPSLAVTSIAASPSVLVAGGYGDGSIRIWDCEKGSCETTLNGHKGAVTALRYNKAGSLLASGSKDNDVILWDVVGETGLFRLRGHRDQVTDVIFVGSGKKLVSSSKDKFLRVWDIDTQHCMQIVGGHHSEIWTLDVDPSERYLVTGSADKELRFYAIKQDSVDGESVNNGGDSSIQNKWEVLTHFGEIQRQSKDRVATVQFNKSGNLLACHVAGKMVEIFRVLDDAEAKRKAKRRVNRKKEKKHGKEDTEGTENGDGSNENKGDNSTVIDGPIEISKMTVTVTDVFKLLHTIRASKKICSISFCPTTPKNSLASLALSLNNNLIEFYSIESGETKKTLAIDLQGHRSDVRSVTLSSDNTFLLSTSHNAVKIWNPTTGSCLRTIDSGYGLCSLILPTNKYGLVGTKDGTLEIIDIGSGTRAEVIEAHGGSLRTIAALPDKHGFVTGSADHDVKFWEYQTKQKPGQATKQLTVSNVRTMRMNDDVLVVAISPDAKYIAVALLDSTVKIHFVDTFKFFLSLYGHKLPVLCMDISSDGDLIVTGSADKNIKIWGLDFGDCHKSIFAHGDSVMAVQFVPKTHYVFSVGKDRLVKYWDADKFELLLTLEGHHADIWCLAVSNRGDFFVTGSHDRSIRRWDRTEEQFFIEEEKEKRLEEMFDADLDNAFENKYVPKEEIPEEGAVAVAGKKTQETLTATDLIIERIDIAEVEKKRLAEHQEEEKNNKNAVFQPNILMNGRSPSDYVLSAFSDVQSNDLEQTLLALPFSDALKLLSYLKEWTSYSDKVELVCRIGTLLLQTHYNQLLATPAARPVLTAFSDIFYERVKGWKDIFGFNLAAMDHIQQLMASRSDALFRDARSKLLEIRARQSKRLQDWSDTGEMILKKKKKT 945
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 102 135 - -
Car03g02531 945 Gene3D - 650 714 IPR015943 GO:0005515
Car03g02531 945 PRINTS G protein beta WD-40 repeat signature 121 135 IPR020472 -
Car03g02531 945 PRINTS G protein beta WD-40 repeat signature 599 613 IPR020472 -
Car03g02531 945 PRINTS G protein beta WD-40 repeat signature 163 177 IPR020472 -
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats profile. 404 444 IPR001680 GO:0005515
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats profile. 102 135 IPR001680 GO:0005515
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats profile. 186 227 IPR001680 GO:0005515
Car03g02531 945 Coils Coil 761 781 - -
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats profile. 664 696 IPR001680 GO:0005515
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 622 654 - -
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 186 220 - -
Car03g02531 945 ProSitePatterns Trp-Asp (WD) repeats signature. 163 177 IPR019775 -
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 580 614 - -
Car03g02531 945 Pfam WD domain, G-beta repeat 578 611 IPR001680 GO:0005515
Car03g02531 945 Pfam WD domain, G-beta repeat 142 176 IPR001680 GO:0005515
Car03g02531 945 Pfam WD domain, G-beta repeat 181 217 IPR001680 GO:0005515
Car03g02531 945 Pfam WD domain, G-beta repeat 404 435 IPR001680 GO:0005515
Car03g02531 945 Pfam WD domain, G-beta repeat 96 134 IPR001680 GO:0005515
Car03g02531 945 Pfam WD domain, G-beta repeat 65 92 IPR001680 GO:0005515
Car03g02531 945 Pfam WD domain, G-beta repeat 659 696 IPR001680 GO:0005515
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats profile. 622 663 IPR001680 GO:0005515
Car03g02531 945 PANTHER WD REPEAT CONTAINING PROTEIN 3 WDR3 1 930 - -
Car03g02531 945 Gene3D - 16 315 IPR015943 GO:0005515
Car03g02531 945 MobiDBLite consensus disorder prediction 293 332 - -
Car03g02531 945 CDD WD40 404 696 - -
Car03g02531 945 ProSitePatterns Trp-Asp (WD) repeats signature. 121 135 IPR019775 -
Car03g02531 945 Gene3D - 336 447 IPR015943 GO:0005515
Car03g02531 945 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 68 676 IPR011047 -
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats profile. 144 185 IPR001680 GO:0005515
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats profile. 61 101 IPR001680 GO:0005515
Car03g02531 945 PANTHER WD REPEAT-CONTAINING PROTEIN 3 1 930 - -
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats profile. 580 621 IPR001680 GO:0005515
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 485 520 - -
Car03g02531 945 MobiDBLite consensus disorder prediction 304 319 - -
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 144 179 - -
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats profile. 485 526 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 95 134 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 478 517 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 137 176 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 397 435 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 179 218 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 532 570 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 615 654 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 438 475 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 657 696 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 54 92 IPR001680 GO:0005515
Car03g02531 945 SMART WD40_4 573 612 IPR001680 GO:0005515
Car03g02531 945 Coils Coil 285 305 - -
Car03g02531 945 CDD WD40 24 272 - -
Car03g02531 945 Pfam Dip2/Utp12 Family 799 899 IPR007148 -
Car03g02531 945 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 664 696 - -
Car03g02531 945 Gene3D - 448 648 IPR015943 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02531 563 705 Miscellaneous Gene Families AT5G08390 25.874 2.61e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02531 K14556 - gmx:100775810 1639.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02531 03 71227793 71236163 Car03g02531 03 71227793 71236163 ECH