Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02518 ATGGAAGAAACTAAGAGAATGGAAGAAGGTTTCAATTCACCATTGGATGTTAAAGATGAGTTGAAGAATCAAGAAACTAATATTGAGTATGACAAAGACACAAAGCTTGAACAGGATCAGCAGATAAAGACAAAGAGGGTTGCAACACTTGATGCATTTAGGGGCCTCACCATAGTGATGATGATACTTGTAGACAAAGCTGGTGGAGCATTTCCACGCATTGATCATGCTCCTTGGAATGGATGTACTTTGGCTGATTTCGTTATGCCTTTCTTTCTTTTCATTGTTGGGGTTGCAATAGCCCTTGCACTAAAGAGAATACACAACATAAAATATGCTGTGAAGAAGATAATGCTTAGAACATTGAAGCTTCTCTTTTGGGGTATACTTTTGCAAGGTGGATATTCTCATGCTCCTGATGATCTATCTTATGGAGTCAACATGAAATTTATCAGATGGTGTGGCATTCTTCAGAGAATAGCCCTTGTATATTGTATTGTGGCTCTAATAGAGACATTTACCACCAAGCTTAGACCTACTACCTTGACTCCTCAACGCCTAGCCATCTTCACTGCCTATAAATGGCAATGGTTTGGAGGCTTCGTAGCATTTTTCGTTTACATGATTACGACTTTCACTCTCTATGTTCCTGATTGGAGTTTTGTTGATCATATTAATGGCGACGAACCAAGGAGATACACAGTGATATGTGGGATGAGAGGACACTTAGGCCCTGCATGTAACGCTGTTGGACATGTGGATAGGCAAGTTTGGGGGGTTAACCATTTTTATTCACATCCTGTTTGGAGACACTTGAAGGAATGCACATTCAACTCTCCGGGTGAAGGTCCATTTCGCGAAGATGCTCCAAGTTGGTGTCGAGCTCCCTTTGAACCTGAGGGCTTGTTGAGTTCCATATCAGCAATCCTCTCTGGCACCATCGGCATCCATTATGGGCACGTCTTGATTCATTTCAAGGGTCATTCAGAGAGGCTTAAACAATGGGTCTCAATGGGGTTTGTGTTACTCACAATTGCCATTATTCTTCACTTTACAAATGCTATCCCAATCAACAAACAACTCTATAGCATCAGCTATGTTTGTTTGACAGCTGGAGCAGCTGGAATTGTCTTCTCTAGCCTCTACATATTGATTGATGTTTGGGGGATCCGTACACCATTTTTGTTCTTGGAATGGATAGGAATGAATTCTATGTTAGTGTTTGTGATGGCAGCTGAGGGAATTTTTGCAGCATTTGTAAATGGATGGTATTATGAAGATCCAAATAACTCACTAGTACATTGGATCAAGAAGCATGTGTTTGTCAATGTTTGGAACTCAGAGAGAGTTGGAACTCTCTTATATGTTATATTTGCAGAAATCACTTTCTGGGGGATTGTTTCTGGCGTGTTGCACAAGCTAGGAATATACTGGAAACTTTAA 1443 0.4068 MEETKRMEEGFNSPLDVKDELKNQETNIEYDKDTKLEQDQQIKTKRVATLDAFRGLTIVMMILVDKAGGAFPRIDHAPWNGCTLADFVMPFFLFIVGVAIALALKRIHNIKYAVKKIMLRTLKLLFWGILLQGGYSHAPDDLSYGVNMKFIRWCGILQRIALVYCIVALIETFTTKLRPTTLTPQRLAIFTAYKWQWFGGFVAFFVYMITTFTLYVPDWSFVDHINGDEPRRYTVICGMRGHLGPACNAVGHVDRQVWGVNHFYSHPVWRHLKECTFNSPGEGPFREDAPSWCRAPFEPEGLLSSISAILSGTIGIHYGHVLIHFKGHSERLKQWVSMGFVLLTIAIILHFTNAIPINKQLYSISYVCLTAGAAGIVFSSLYILIDVWGIRTPFLFLEWIGMNSMLVFVMAAEGIFAAFVNGWYYEDPNNSLVHWIKKHVFVNVWNSERVGTLLYVIFAEITFWGIVSGVLHKLGIYWKL 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02518 480 Pfam Heparan-alpha-glucosaminide N-acetyltransferase, catalytic 46 176 IPR012429 -
Car03g02518 480 PANTHER LD22376P 19 480 - -
Car03g02518 480 PANTHER HEPARAN-ALPHA-GLUCOSAMINIDE N-ACETYLTRANSFERASE-LIKE PROTEIN 19 480 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02518 Car-Chr3 71077894 71080639 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02518 K10532 - gmx:100819967 823.542
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02518 03 71077894 71080639 Car03g02518 03 71077894 71080639 ECH
Car03g02518 03 71077894 71080639 Car04g00741 04 7268249 7281400 PCT