Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02514 ATGGACCCCTTCCATTGGCGCAACTTCAACCACAACAATCTTCCCTCCTTTTGGCCTAACTTCAACCACTACGACATTCCCTTCGATTGGCGTTACTTCAACGAGGCTGATATTCCCACTACTGAATCTCTCATGGCTGCCGGAGCCGATCCTCGATTCACCGCATATTTGTTAGAAGGTCACACcgacgacgaacaagacgacgaagaagatgacgatgatgaggaGTACGTTCCCGATGTTCAGTCCCCTAGGGTTTCTAACGAAGCTCCTCGTAATTCTACATCTGATGAAGCAATCGTTATTCTCGACGATGAACGTCAAAGTTCGGTTGAAAACGAAACAAACAAACGACGCAGAACTGAAGCGGGAGAGGCTTCGTCTTCTTCGTTACCAAATGGAAGCGCAGACGGTAGTCAAGAGAATGAATGTAATCTCGCCGACATTGACGGTCTCATTTGCCCTATTTGTATGGACGCTTGGACCGATAAGGGTGATCATCACGTCTGTTGTCTTCCTTGTGGACACATTTATGGCATGTCTTGCATTAAAAAGTGGCTTCAACAGCGAAAAAATTCGGGGAAGTGTCCTCAATGTAATAGGAAATGTTCGATGAAGGATGTGAGGAAACTTTATGCTTCTCGAATAGTTGCTGTTGATGAAGAATCTCAGAAGAGAATTCGGTCACTTGAGATCAAATGTGCTACTCTTGAAAGTAAGGATGGTGATTGGCGGATGAAAGAAGCGGGATGGAAGAAGAGAGAATCTGCATTGCATCTTGATGTTAAGAACCTTAAACAGAGACAGACTTATCTGGAGCAGCTGGTACTAGATATGCAGAGCAGACAATCTGGATTAATGGATGCCAATGGGAACTCTCAATGGAGATATGAACCTGAGCGCAGCTGTAACCCGAGGTCCCATGGAAAAGGATCTTTTTGCAATTTTGAATTTCAGAAAGCATTTCATCTGGAAGGTGCTCGTGTATTTGATATGGACACTTCTAATGAAATTTTATTAGTCGCACAAAAGCCAAGAGCAATGGGTGATGTGCACTTGCTCACTAAAATGAGCTTGATATCTCCATTTGAGATGCAAGATATTGTACTGCCTTCATCTGCAAATGGTATTAGAGACCTGCATATTTCTCCTTTTGATAGTAGACAGGCCCTTTATGCTTCGTTAGGGAAAAAATTATCAGTTCTCAGCTTCGAAAGTGGCACCCCTGTTCTCAATTATGATCTACAGGTTTCTGCTTGGTCCTGTGCATGGGATATTAACAGTACACATTACATCTATGCTGGGCTGCAGAATGGTTCTGTCCTGGTGTTTGACATGAGACAAACTGCAGGACCCTTAAAATCTTTAGCTGGGTTGACTTGCAACCCTGTTCATAGTGTGTATTCTCTTGCAGAAACATCAAGTCTTCCTTCTGGTGCCAGAACCATCCTATCCGCATCTGCCATTGGCCCTTGTCAGTGGGACATTGATTCTGAAGAACGGCCATTTATGGTTCCTGAGACTGATAATCAAGGAGTTTGTATATCTCTTGCCTATTGCCCGAGCAGTGATGACATTGTTGTTTCATACCGTCCAAAGTTCAACACATTGATGGATGCGCCTCTTTCTCAACCGTCGCCCACTCCTTATCATGCTGTTGGACAAGGAGTACAGGGATGTCATGTATTGTTAAAGAGAACAGGCAGTCATAATTTCGAAAAGATGGGTTCCTCGTATGCCAATGTTAGTAAAATTCGACTACCAAAATGTGTAATTATAGACATAGACAATCAGAATAGATTGTTTGCATCGGGAGATGAAGTTACAGGTGACTTGGTCTTGCAAGAATTGCCATCTTTTAGAGTTATTCAGCAATTCAAAATGCCAGCTCAGGCCCGTGATATTAGGTACTCACCTAGCCATGGAATACTTGGTTGTTTAAGTGAGAACTCATTGCAACTTTTCCGCACCAATCTCTCTTGA 1983 0.4226 MDPFHWRNFNHNNLPSFWPNFNHYDIPFDWRYFNEADIPTTESLMAAGADPRFTAYLLEGHTDDEQDDEEDDDDEEYVPDVQSPRVSNEAPRNSTSDEAIVILDDERQSSVENETNKRRRTEAGEASSSSLPNGSADGSQENECNLADIDGLICPICMDAWTDKGDHHVCCLPCGHIYGMSCIKKWLQQRKNSGKCPQCNRKCSMKDVRKLYASRIVAVDEESQKRIRSLEIKCATLESKDGDWRMKEAGWKKRESALHLDVKNLKQRQTYLEQLVLDMQSRQSGLMDANGNSQWRYEPERSCNPRSHGKGSFCNFEFQKAFHLEGARVFDMDTSNEILLVAQKPRAMGDVHLLTKMSLISPFEMQDIVLPSSANGIRDLHISPFDSRQALYASLGKKLSVLSFESGTPVLNYDLQVSAWSCAWDINSTHYIYAGLQNGSVLVFDMRQTAGPLKSLAGLTCNPVHSVYSLAETSSLPSGARTILSASAIGPCQWDIDSEERPFMVPETDNQGVCISLAYCPSSDDIVVSYRPKFNTLMDAPLSQPSPTPYHAVGQGVQGCHVLLKRTGSHNFEKMGSSYANVSKIRLPKCVIIDIDNQNRLFASGDEVTGDLVLQELPSFRVIQQFKMPAQARDIRYSPSHGILGCLSENSLQLFRTNLS 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02514 660 PANTHER RFWD3 PROTEIN 63 656 IPR037381 GO:0004842|GO:0005634|GO:0016567|GO:0036297
Car03g02514 660 MobiDBLite consensus disorder prediction 99 124 - -
Car03g02514 660 Pfam Ring finger domain 154 200 IPR001841 -
Car03g02514 660 PANTHER E3 UBIQUITIN-PROTEIN LIGASE 63 656 - -
Car03g02514 660 SUPERFAMILY WD40 repeat-like 370 655 IPR036322 GO:0005515
Car03g02514 660 MobiDBLite consensus disorder prediction 125 142 - -
Car03g02514 660 SUPERFAMILY RING/U-box 147 206 - -
Car03g02514 660 Gene3D - 327 658 IPR015943 GO:0005515
Car03g02514 660 SMART ring_2 154 199 IPR001841 -
Car03g02514 660 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 148 267 IPR013083 -
Car03g02514 660 Coils Coil 220 240 - -
Car03g02514 660 CDD mRING-C3HGC3_RFWD3 150 200 - -
Car03g02514 660 MobiDBLite consensus disorder prediction 63 142 - -
Car03g02514 660 MobiDBLite consensus disorder prediction 63 78 - -
Car03g02514 660 ProSiteProfiles Zinc finger RING-type profile. 154 200 IPR001841 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02514 K15691 - gmx:100818898 751.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02514 03 71048347 71054057 Car03g02514 03 71048347 71054057 ECH