Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02495 ATGCCTGCAACTCCATTTTCGTGTTCGTTCCTCGTTTTGCAACCGCGCTTCAATCACTACATTAACCCTATCTTCCGTTCACTCACCTACCAACTCTCTTCTTCACCGTTCCAATCCAATGTCAGACTCCACTGTGCACTCTCGCAAGCGGCAGAGGCCGAATCTCCAACTGGCGGTCGCTCTGGTGCATTGTCTCCCGGTCCTACGGTCACCGGTGAAGTTCAGAAAATTGACGTGAATCCTCCCAAGGGGACGCGTGACTTCCCGCCCGAGGATATGCGATTGCGCAACTGGCTTTTTAACAATTTCAAAGAGGTGTCGCGGTTGTATGGATTTGAGGAGATTGATTTTCCGGTTCTTGAGTCGGAGGCATTGTTCACTAGGAAAGCAGGAGAGGAGATTAAGGACCAGCTTTACTGTTTTGAAGATCGGGGTAATCGCCGCGTTGCGTTGAGGCCTGAACTTACTCCTTCTTTGGCAAGGCTGGTGATACAGAAAGGGAAGTCCATATCACTACCATTGAAGTGGTTCACTGTTGGACAATGTTGGCGGTATGAGAGAATGACAAGAGGACGTCGTCGTGAGCACTACCAGTGGAATATGGATATCATTGGTGTTCCTGGGGTTATGGCTGAAGCAGAGCTTATATCTTCCATTGTTACTTTGTTCAAGCGCATAGGAATTACAGAATCGGATGTTGGATTTAAGGTTTCTAGTCGAAAGGTTCTACAAGAAGTATTGAAGTGTTATTCAATACCTGATAATATGTTTGGCAAGGTCTGCGTCATTATTGATAAAATTGAGAAAATTCCAGTTGATGAGATAAAGAAAGAGTTGAATGCTGTTGGTCTATCACAGGAGGCTATTGAGGAGCTATTGCTAGTCCTTTCTGTAAAGTCATTGACCGAATTAGAAGAGAGACTCGGAGGCAGTGGGGAAGCAATTGCTGATCTCAAACAGCTATTCTCACTGGCTGAAAAGTTTGGTTACTCCAAATGGCTTCAATTTGATGCGTCAGTTGTTCGTGGCCTTGCTTATTACACTGGCATTGTATTTGAGTTGCTCAGAGAGAAGGGTCTGCTACCAGAGCTCAGCTTGCAAGTAGATAACATTGTTTGTGCCTTGGATGAAGAACTTCAAGGGTATGCTGCTATGGCGGCTAACATTCTCAGAGAGAAAGGACAGAGTGTTGACTTGGTTTTGGAAAGCAAACCACTTAAATGGGTGTTTAAACGTGCAGCCAGAACAAATGCTGAGCGGTTGGTATTAGTAGGAAATTCTGAGTGGCAAAGGGGTGTGGTTGGTGTCAAAGTTCTCTCCACTGGTGAACAGTATGAGGTTAAACTGGATGATCTAAAGTAA 1362 0.4523 MPATPFSCSFLVLQPRFNHYINPIFRSLTYQLSSSPFQSNVRLHCALSQAAEAESPTGGRSGALSPGPTVTGEVQKIDVNPPKGTRDFPPEDMRLRNWLFNNFKEVSRLYGFEEIDFPVLESEALFTRKAGEEIKDQLYCFEDRGNRRVALRPELTPSLARLVIQKGKSISLPLKWFTVGQCWRYERMTRGRRREHYQWNMDIIGVPGVMAEAELISSIVTLFKRIGITESDVGFKVSSRKVLQEVLKCYSIPDNMFGKVCVIIDKIEKIPVDEIKKELNAVGLSQEAIEELLLVLSVKSLTELEERLGGSGEAIADLKQLFSLAEKFGYSKWLQFDASVVRGLAYYTGIVFELLREKGLLPELSLQVDNIVCALDEELQGYAAMAANILREKGQSVDLVLESKPLKWVFKRAARTNAERLVLVGNSEWQRGVVGVKVLSTGEQYEVKLDDLK 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02495 453 Pfam Histidyl-tRNA synthetase 84 357 IPR041715 -
Car03g02495 453 PIRSF His-tRNA_synth 353 453 IPR004516 GO:0005737
Car03g02495 453 PIRSF His-tRNA_synth 75 360 IPR004516 GO:0005737
Car03g02495 453 ProSiteProfiles Aminoacyl-transfer RNA synthetases class-II family profile. 84 337 IPR006195 -
Car03g02495 453 PANTHER HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED 75 355 - -
Car03g02495 453 PANTHER HISTIDINE--TRNA LIGASE, MITOCHONDRIAL-RELATED 353 453 - -
Car03g02495 453 MobiDBLite consensus disorder prediction 53 88 - -
Car03g02495 453 CDD HisRS-like_core 92 353 IPR041715 -
Car03g02495 453 Pfam Anticodon binding domain 372 452 IPR004154 -
Car03g02495 453 SUPERFAMILY Class II aaRS and biotin synthetases 81 358 IPR045864 -
Car03g02495 453 SUPERFAMILY Class II aaRS ABD-related 368 452 - -
Car03g02495 453 Gene3D Bira Bifunctional Protein; Domain 2 75 369 IPR045864 -
Car03g02495 453 Gene3D - 370 453 IPR036621 -
Car03g02495 453 PANTHER HISTIDYL-TRNA SYNTHETASE 75 355 IPR004516 GO:0005737
Car03g02495 453 PANTHER HISTIDYL-TRNA SYNTHETASE 353 453 IPR004516 GO:0005737
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02495 K01892 - gmx:100793186 780.015
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02495 03 70769862 70781388 Car03g02495 03 70769862 70781388 ECH