Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02447 ATGAGAGATTTTGTGATCCTCGGTTCTTCCATCGTCAATCCTCCTCCAAACCCATCATCACAACCCCGTCACACTATCAAACCCCACAATTCTTCTCTCTCGAAGCTCCCTTCTTTATCTCCACGGAAGAATTCTACTACCCTTCTCCAAACCCCTCTCATTCTCAAACAATTCGAAACGGTTCTACATGACGCTGTTGATTCTGACTTGAATGCTGAGCTTTTGGCCAACGCGGTTCTGATGGGTATCAAAGGAAGGAACTTTCGGATTGTGATTGATAGTTTGAACAAATTGCAGGGTATTGGGAATGGGATTTCTCTCTCTACTCAATTTGATGAATCTGCTATGAGTGTCATTGCAAAGGAGTGTTCTTTCATGGTCACGTCTGGTCACATTCAGGAATCTGTTGAATTGATGGAGGTTCTCTCACGTTACCAGCTATCAATTGGAGAACTTGTTCAGCCATCTGACATAATAAAAAGATGTGTTCTTAATCGTAAGCCAAATTTAGCTGTGAGGTATGCGTCCCTTCTTCCACAAGCACATATACTATTTTGTAGCATCATATCTGGATTTGGCAAAAGTAGGGATTTAGTTTCTGCTCTGAAAGCCTACGATGCAATGAAGAAGAATCTGAAACGTCCCAATATGTACATATACCGGGCAATAATCGACGTTTGTGGTCTATGTGGCGATTTCATGAAATCTAGGTACATATATGAGGATTTGCTTAATCAGAAAATCACTCCAAATATATATGTATTCAACAGTCTCATGAATGCCAATGCCCATGATATCAGCTACACGTTAAATCTATACCAGAATATGCAGAAGGTAGGCTTGAAACCAGATATGACATCCTATAACATCCTACTGAAAGCATGCTGTGTTGCTGGAAGAGTTGACCTGGCCCAAGACATGTATAAGGAACTTAAGCATTTGGAATCAATTGGACAACTGAAATTAGATGTTTTTACCTACAGTACAATTATTAAGGTCTTTGCAGATGCGAAATTGTGGCAAATGGCTCTAAAAATTAAGCACGACATGCTGTTGGCTGGTGTTTCTCTTAATACCGTTGCATGGTCATCATTAATCAATGCCTGTGCACATGCAGGGCTTGTAGAGCAGGCAATTCAGTTATTTGAAGAGATGCTTTTGTCTGGCTGTGAACCTAATACACAGTGTTTCAACATCATTTTACATGCATGTGTCGAAGGTTGCCAGTATGACAGGGCTTTTCGCTTTTTCTATTCTTGGAAGGGAAATAAGACTTTAGTGTCCTTTGGTGAAAGCCACAATAGCAATGCAGAGGAGGGAGGCATGGATAGTGTTACCACCACAGTGCCAAAAGGCATTTCTAGTTCGCATATCATGAGTTTTACTGAGAGGTTCCCCTTCAAACCAACTACATCGACATACAATACTTTACTGAAGGCCTGTGGAACTAATTACTATCACGCAAAAGCATTAATCAACGAGATGAAAACAGTAGGTCTTTCCCCTAATCAAATAAGCTGGTCAATTTTGATAAATATATGCGGAGGATCAGAAAATGTGGAGGGTGCCATTGAGATTTTGAGAACCATGATTGATGCTGGAGTTAAACCTGATGTTGTTGCATATACAACAGCCATTAAGGTTTGTGTCGAAAGTAAGAATTTTACGAAAGCATTAACACTATATGAAGAAATGAAAAGCTATGAGACGCAACCAAATTTGGTGACATATAACACACTGCTAAGGGCACGCAGTAAATATGGATCCTTACGTGAAGTGCAACAGTGCCTGGCTATATATCAGGATATGCGAAAGGCAGGGTACAAACCCAATGACTACTACCTGGAGGAGCTGATTGAGGAGTGGTGTGAAGGAGTAATACAAGACAACGAAGAGTACGAAGTAGAATTTTCTTCCAGCAAGAAACCTGAAATAGAGAGACCTGAAAGTTTACTTCTTGAAAAAATCGCGGCCCACCTACTAAAGAGGGTAGCTGACATCTTGGCAATTGATGTTCAAGGTCTCTCAAAGGTTGAAGCTCGCCTGGTCATTCTTGCAGTTCTTCGAATGATCAAAGAGAACTATGCTTTTGGGCATTCAGTGAATGATGACATCTTGATCATCATAGGAGCTACCAAAGCAGATGAAAGTCCAGCAAAAGAAATATTAGAAGTGCAAGAGGCTGTGATAAAACTTCTTAGGAATGAATTGGGGCTTGAGGCTCTTCCAGCCAAAACCAGATTTGCACCAAGTGACTCACCAAAGTTACAGAACACCAAAGAGAATGCATTACCCACAACAATGGTGTTTCACACAAGGAGACCTGCAGTTCTACAAAGATTGAAGGTCACTAAACAATCATTACACCGTTGGTTGCAAAGGAGAGTAAGTGTAAAATAG 2400 0.4071 MRDFVILGSSIVNPPPNPSSQPRHTIKPHNSSLSKLPSLSPRKNSTTLLQTPLILKQFETVLHDAVDSDLNAELLANAVLMGIKGRNFRIVIDSLNKLQGIGNGISLSTQFDESAMSVIAKECSFMVTSGHIQESVELMEVLSRYQLSIGELVQPSDIIKRCVLNRKPNLAVRYASLLPQAHILFCSIISGFGKSRDLVSALKAYDAMKKNLKRPNMYIYRAIIDVCGLCGDFMKSRYIYEDLLNQKITPNIYVFNSLMNANAHDISYTLNLYQNMQKVGLKPDMTSYNILLKACCVAGRVDLAQDMYKELKHLESIGQLKLDVFTYSTIIKVFADAKLWQMALKIKHDMLLAGVSLNTVAWSSLINACAHAGLVEQAIQLFEEMLLSGCEPNTQCFNIILHACVEGCQYDRAFRFFYSWKGNKTLVSFGESHNSNAEEGGMDSVTTTVPKGISSSHIMSFTERFPFKPTTSTYNTLLKACGTNYYHAKALINEMKTVGLSPNQISWSILINICGGSENVEGAIEILRTMIDAGVKPDVVAYTTAIKVCVESKNFTKALTLYEEMKSYETQPNLVTYNTLLRARSKYGSLREVQQCLAIYQDMRKAGYKPNDYYLEELIEEWCEGVIQDNEEYEVEFSSSKKPEIERPESLLLEKIAAHLLKRVADILAIDVQGLSKVEARLVILAVLRMIKENYAFGHSVNDDILIIIGATKADESPAKEILEVQEAVIKLLRNELGLEALPAKTRFAPSDSPKLQNTKENALPTTMVFHTRRPAVLQRLKVTKQSLHRWLQRRVSVK 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02447 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 573 610 IPR002885 -
Car03g02447 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 358 392 IPR002885 -
Car03g02447 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 503 537 IPR002885 -
Car03g02447 799 PANTHER OS03G0284900 PROTEIN 66 765 - -
Car03g02447 799 Pfam PPR repeat 325 355 IPR002885 -
Car03g02447 799 Pfam PPR repeat family 358 404 IPR002885 -
Car03g02447 799 TIGRFAM PPR: pentatricopeptide repeat domain 287 312 IPR002885 -
Car03g02447 799 TIGRFAM PPR: pentatricopeptide repeat domain 360 394 IPR002885 -
Car03g02447 799 TIGRFAM PPR: pentatricopeptide repeat domain 218 252 IPR002885 -
Car03g02447 799 TIGRFAM PPR: pentatricopeptide repeat domain 505 539 IPR002885 -
Car03g02447 799 TIGRFAM PPR: pentatricopeptide repeat domain 325 358 IPR002885 -
Car03g02447 799 TIGRFAM PPR: pentatricopeptide repeat domain 575 611 IPR002885 -
Car03g02447 799 TIGRFAM PPR: pentatricopeptide repeat domain 540 573 IPR002885 -
Car03g02447 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 538 572 IPR002885 -
Car03g02447 799 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN-RELATED 66 765 - -
Car03g02447 799 MobiDBLite consensus disorder prediction 23 42 - -
Car03g02447 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 323 357 IPR002885 -
Car03g02447 799 Pfam Pentacotripeptide-repeat region of PRORP 473 619 IPR033443 -
Car03g02447 799 Pfam Pentacotripeptide-repeat region of PRORP 193 312 IPR033443 -
Car03g02447 799 Gene3D Tetratricopeptide repeat domain 458 650 IPR011990 GO:0005515
Car03g02447 799 Gene3D Tetratricopeptide repeat domain 182 314 IPR011990 GO:0005515
Car03g02447 799 Gene3D Tetratricopeptide repeat domain 315 457 IPR011990 GO:0005515
Car03g02447 799 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 284 314 IPR002885 -
Car03g02447 799 MobiDBLite consensus disorder prediction 9 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02447 Car-Chr3 70284763 70291363 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02447 183 652 Glycosyltransferase AT1G05670 22.567 1.19e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02447 - - gmx:100794606 1153.66