Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02420 ATGGCCATAACCGCCACCATTTCACTTTCTCTTACCTCACCCACTCATCGCTCTCTTCTCTCTCTTCCTTCTTCCCGATCCATTTCAACCACACTACAACGCACTTTCAAATACCCTAATTCCCGCCTCATTGCTAATTCCTCCATCAAAACACATACTCCTTTAAAAACAAATTCATTTCTCCACCAACAGGAAAGTGACTTTCTCCATTTCGCTAAGTTTCACGGCCTCGGAAACGACTTCGTTTTGATCGATAATCGAGACTCTTCTGAACCAAAAATTAGTTCAGAGAAAGCTGTGAAACTCTGTGATCGTAACTTCGGTGTTGGTGCTGATGGAGTTATCTTTGTTTTGCCTGGTATCAATGGCACTGATTACACAATGAGGATTTTCAATTCTGACGGTAGTGAACCTGAGATGTGTGGAAATGGAATGCGATGCTTTGCTAAATTTGTTTCTCAGCTTGAGAGTTTACATGGAAGACATAGTTTCACCATACACACTGGTGCTGGGCGGATTGTTCCTGAAGTCTTGGAGGACGGAAATGTTAGAGTTGATATGGGGCAACCGACTCTTAAAGCATCGGATGTGCCCACTAAATTATCTCCCAATAAGGATCATGCTGTTGTTAAATCAGAGATAGATGTTGATGGAGTTATCTGGAATGTGACACTTGTTAGCATGGGAAATCCACACTGTGTAACCTTCAGTAGCAAAGAAAGCCAGAATTTGGTCGTTGATGAATTGAAGCTAGCACAAATTGGCCCAAAATTTGAACATCATGAGATGTTCCCTGCACGAACGAACACAGAGTTTGTGCAAGTCCTTTCTAATTCTCACCTGAAGATGCGTGTTTGGGAGCGTGGAGCAGGGGCAACTCTTGCCTGTGGAACTGGAGCTTGTGCTACAGTTGTTGCAGCAGTTCTTGAGGGGCGTGCTGGGCGGAACTGCACGGTTGATCTACCTGGAGGGCCTCTTCAGATTGAATGGAGGGAAGAAGATAATCACGTCTATATGACAGGTTCTGCAGACCTAGTGTATTATGGATCTTTGCCCCTTTAA 1062 0.4407 MAITATISLSLTSPTHRSLLSLPSSRSISTTLQRTFKYPNSRLIANSSIKTHTPLKTNSFLHQQESDFLHFAKFHGLGNDFVLIDNRDSSEPKISSEKAVKLCDRNFGVGADGVIFVLPGINGTDYTMRIFNSDGSEPEMCGNGMRCFAKFVSQLESLHGRHSFTIHTGAGRIVPEVLEDGNVRVDMGQPTLKASDVPTKLSPNKDHAVVKSEIDVDGVIWNVTLVSMGNPHCVTFSSKESQNLVVDELKLAQIGPKFEHHEMFPARTNTEFVQVLSNSHLKMRVWERGAGATLACGTGACATVVAAVLEGRAGRNCTVDLPGGPLQIEWREEDNHVYMTGSADLVYYGSLPL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02420 353 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 204 337 - -
Car03g02420 353 Pfam Diaminopimelate epimerase 71 192 IPR001653 GO:0008837|GO:0009089
Car03g02420 353 Pfam Diaminopimelate epimerase 225 345 IPR001653 GO:0008837|GO:0009089
Car03g02420 353 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 44 200 - -
Car03g02420 353 TIGRFAM DapF: diaminopimelate epimerase 70 351 IPR001653 GO:0008837|GO:0009089
Car03g02420 353 ProSitePatterns Diaminopimelate epimerase signature. 132 146 IPR018510 GO:0005737|GO:0008837|GO:0009089
Car03g02420 353 SUPERFAMILY Diaminopimelate epimerase-like 69 198 - -
Car03g02420 353 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 35 352 - -
Car03g02420 353 SUPERFAMILY Diaminopimelate epimerase-like 213 351 - -
Car03g02420 353 Hamap Diaminopimelate epimerase [dapF]. 69 353 IPR001653 GO:0008837|GO:0009089
Car03g02420 353 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 35 352 IPR001653 GO:0008837|GO:0009089
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02420 Car-Chr3 70096208 70099934 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02420 K01778 - gmx:100807528 566.614