Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02417 ATGAGAAAAGAATTGAAAAAATCCAAGTATTCATGGCCGAAATTAGACGTGAGGAATTGGCTTAATACAAAGATCAATTCTGAAAAGTTTTCCTCAGACTTCTCTGTTAAAGACTATGCAACAGAAATGAGAAAGAGTTGCTCTGACCATGACAGTTACATCTTCGTACCAGATCATTTCTCAGGGTGGTTGAAGCATTCTACAAATGGCGTGAAACGTTCGGTACTTGGGGAGAAAAAAGCTCCTGCCATCACTGATGCTCTCAACCTTAGGATGTTTGTGGGGACGTGGAATGTTGGGGGAAAGTCACCAAGCGAAGGTTTGGACTTGAGGAATTGGCTGACGTCTACTTCGCCAGCTGACATATATGTTATTGGGTTCCAAGAAATTGTACCGCTAAATGCAGGAAACGTGCTTGGGTCGAAAGATAGTGGGCCAGCAGCGAAGTGGCTGGGCCTTATTAATGAAGCCCTGAACACCAACAACCATGAAAGCCCAATTCATAAGCAACGCTATAACTTAGTAGCAAGCAAACAAATGGTTGGTATCTTTTTGTGCGTGTGGGTACGCACAAATTTTAGCAACCATGTTAGTAATTTAAAAGTGTCTCGCGTTGGCACAGGCATCATGGGCTATCTTGGAAATAAGGGTTCAATATCAATTAGTATGAGATTGTACCAGACCACATTTTGCTTCGTTTGCACACATTTGGCATCTGGAGAGAAATATGGTGATGAGTTGCGAAGAAACTTGGACATCTCGGAAATATTAAAGAGAACTAAATTTTTTCGTTCGTCTAAATCAATTGGTCATTCACTCTCTCCCGAAAGCATACTAGAACATGATAATATTATTTGGTTGGGGGATTTAAATTATCGACTTGCCGCTGGTTACGATGATATACATGAGCTACTAAAAAAGAATAATTGGAAGGCATTACTAGAGAAAGATCAGCTAAGGAGGGAGCAAAAAGCTGGTCGAATATTTGAAGGTTGGAATGAAGGGACCATATACTTTGCTCCTACTTATAAATACTTGACTAATTCTGACCAATATGTTGCCCAAACATGCAAATCCAAGGAAAAACGACGCACTCCTGCTTGGTGCGATAGAATACTATGGAAAGGGGAAGGACTAAATCAGATGTTATATGTTCGAGGAGAGTCAAAATTCTCTGACCACAGGCCTGTGTATTCACTATTCTCAGCACAAGTGGACATGAATACAAGCAACAATCTCACTCGCTCTTCTAGTACCACTGTCCCAATATCCTGTTCCTTAAAACCATTCACAAATTCTTCTGCTTCTTGTTGCCCTGCTAGAGTTCAGGCAGAAGAGCAGCTCATGTTACTAGCCAGGACACAAAGTTGCATACACACCATTTCTAGATTCTAG 1395 0.4108 MRKELKKSKYSWPKLDVRNWLNTKINSEKFSSDFSVKDYATEMRKSCSDHDSYIFVPDHFSGWLKHSTNGVKRSVLGEKKAPAITDALNLRMFVGTWNVGGKSPSEGLDLRNWLTSTSPADIYVIGFQEIVPLNAGNVLGSKDSGPAAKWLGLINEALNTNNHESPIHKQRYNLVASKQMVGIFLCVWVRTNFSNHVSNLKVSRVGTGIMGYLGNKGSISISMRLYQTTFCFVCTHLASGEKYGDELRRNLDISEILKRTKFFRSSKSIGHSLSPESILEHDNIIWLGDLNYRLAAGYDDIHELLKKNNWKALLEKDQLRREQKAGRIFEGWNEGTIYFAPTYKYLTNSDQYVAQTCKSKEKRRTPAWCDRILWKGEGLNQMLYVRGESKFSDHRPVYSLFSAQVDMNTSNNLTRSSSTTVPISCSLKPFTNSSASCCPARVQAEEQLMLLARTQSCIHTISRF 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02417 464 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 8 166 IPR045849 GO:0004445|GO:0046855
Car03g02417 464 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 166 448 IPR045849 GO:0004445|GO:0046855
Car03g02417 464 Gene3D Endonuclease/exonuclease/phosphatase 71 424 IPR036691 -
Car03g02417 464 SUPERFAMILY DNase I-like 82 407 IPR036691 -
Car03g02417 464 Pfam Endonuclease/Exonuclease/phosphatase family 95 394 IPR005135 GO:0003824
Car03g02417 464 SMART i5p_5 88 409 IPR000300 GO:0016791|GO:0046856
Car03g02417 464 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 166 448 - -
Car03g02417 464 PANTHER TYPE I INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 8 8 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02417 Car-Chr3 70074502 70079089 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02417 51 406 Acyl Lipid Metabolism Gene Families AT2G43900 30.825 6.41e-45 166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02417 - - gmx:100777569 664.455