Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02378 ATGCTTATGCATTTAATAAGTTATTCGGTCATTTCCAATTTTAATTTATGTGCTAAATGGCTACAGGTTAGGTTCCATCCGTTACATCCACAAATACTTGCTAGTGGGAGCTTGGATCAAGAAGTTCGATTATGGGATGCTAACACATCCGAGTGCATAGTATCTCACCATTTCTATCGACCAATTGCATCCATTGCTTTTCATGCCAAAGGGGAAATAATTGCCGTTGCATCAGGCCACAAGCTTTACATATGGCACTACAACAAGAAAGGCGAAGCATCTTCACCAATGTTTGTGTTAAAGACAAGGCGATCTCTACGGGCTGTGCATTTTCACCCTCATGCTGCTCCATATCTTTTAACTGCTGAGGTCAATGATCTTGATTCTTCAGATTCATCAATGACAGAGGCAACATCGATCGGTTATTTACAATATCCTCCACCTGCCGTTTTTGTCACAAATGTTCATCCTACGGAACATGTTAGTGAACCACCTTATGTGTCATTGCCTTTCTTTCTCGTGCCTTCATATACTGTTGATGAGTCAAGAGCAGAGTTACCACATGCTAGTCATGATGTTGCCTCGGGTAGAATGCAAATTGAGTCGTCCGCCACAGTTCAGTTTCAAGCAGACACAAATGCAACAGAACAATATGATACTACAGTGTCTCCCATGGATACAGTCTCCGAGATCCCCACTAACTCTCAAACAGGTACAGAATATCCTGCTCATACTACTTTCTCTAATGGAATGGGAATTGGCATCCGCAACCTCACAATGGATGGTACAACTGATGGTATGGAGACTGATGAAACCAGACCTGTTGAAGGAAGTCAACACGTAAACCCCACTGATGCAAATTCTCTCAATGGTATGTTACATGGAGTACCTAGACAAACTGCAAATCGCGGGGTTCTTTCAGAGTTTGGTCAGTTTCATCAGTATTTTTCTTCCAGAGAGCCAAGTGGATGGGAGTTACCTTTTCTGCAAGGATGGTTGATGGGTCAAAGCCAAGTTGGTGCTCCCTCAATGCTACCTCACATGGGTGTTAGTCGTGATACACAAGCTCAACAGATTAGTTCTTCTGCAATGGCTAATAATCTTTCCACTTCTAATGTTGATGTAGCAATGCCACCTTCAGCAATGTCTGGCAGTATCAACATACCTGGATCTTCTATAAGATCAGGTTTACAGAATCATTTTTCACAATCGCGTACACCTGTATCTGAATCCGGAAATCTTGCTGCTTCTATTACTACCCCACATGATGGATCTGACATCCAAACCATCATGAGTCGAATCCAGTCAGAAATCGCTACATCTGTGgctgcagctgctgctgctgAACTGCCTTGTACCGTGAAGTTAAGAGTATGGTCTCATGACATAAAAAATCCCTCTACCCCACTAAATGCTGACAGATGTCGTCTTACCATACCTCACGCTGTCCTCTGCAGTGAAATGGGTGCCCATTTTTCACCATGCGGTAGATTTTTAGCTGCATGTGTTGCATGTATGCTTCCACGCATAGAAGCTGATCCAGGGTTACAAACGCCAGTACATCAAGAGCCTGGTGTTGCAACATCACCGACTCGGCATCCAATATCAGCACACCAAGTTATGTATGAGCTGCGGATATATTCCCTTGAGGAGGCAACATTTGGATCGGTGCTTGCTTCTCGGGCAATTAGAGCAGCTCATTGTCTGACTTCAATTCAGTTCTCACCTACATCTGAGCACATACTCCTTGCCTATGGTCGACGACACGGTTCTCTTCTTAAAAGCATTGTCATTGATGGAGAAACAACATTACCTATATATACAGTGTTAGAGGTATATAGAGTTTCGGATATGGAACTTGTTAGGGTGCTTCCTAGTGCTGAAGACGAGGTCAATGTGGCGTGCTTTCATCCTTTCGCTGGGGGCGGGTTAGTTTACGGAACAAAGGAAGGAAAGCTTAGGATCCTCCACTATAATGGTGCTCATCCAGTGAATGGAACTGGACCAAGTTACTTTCCTGAGGAGACCATTGTTGGAGTCAGTCAATGA 2049 0.4314 MLMHLISYSVISNFNLCAKWLQVRFHPLHPQILASGSLDQEVRLWDANTSECIVSHHFYRPIASIAFHAKGEIIAVASGHKLYIWHYNKKGEASSPMFVLKTRRSLRAVHFHPHAAPYLLTAEVNDLDSSDSSMTEATSIGYLQYPPPAVFVTNVHPTEHVSEPPYVSLPFFLVPSYTVDESRAELPHASHDVASGRMQIESSATVQFQADTNATEQYDTTVSPMDTVSEIPTNSQTGTEYPAHTTFSNGMGIGIRNLTMDGTTDGMETDETRPVEGSQHVNPTDANSLNGMLHGVPRQTANRGVLSEFGQFHQYFSSREPSGWELPFLQGWLMGQSQVGAPSMLPHMGVSRDTQAQQISSSAMANNLSTSNVDVAMPPSAMSGSINIPGSSIRSGLQNHFSQSRTPVSESGNLAASITTPHDGSDIQTIMSRIQSEIATSVAAAAAAELPCTVKLRVWSHDIKNPSTPLNADRCRLTIPHAVLCSEMGAHFSPCGRFLAACVACMLPRIEADPGLQTPVHQEPGVATSPTRHPISAHQVMYELRIYSLEEATFGSVLASRAIRAAHCLTSIQFSPTSEHILLAYGRRHGSLLKSIVIDGETTLPIYTVLEVYRVSDMELVRVLPSAEDEVNVACFHPFAGGGLVYGTKEGKLRILHYNGAHPVNGTGPSYFPEETIVGVSQ 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02378 682 SUPERFAMILY WD40 repeat-like 491 663 IPR036322 GO:0005515
Car03g02378 682 PANTHER ACTIVATING MOLECULE IN BECN1-REGULATED AUTOPHAGY PROTEIN 1 23 681 - -
Car03g02378 682 Gene3D - 17 124 IPR015943 GO:0005515
Car03g02378 682 ProSiteProfiles Trp-Asp (WD) repeats profile. 31 55 IPR001680 GO:0005515
Car03g02378 682 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 23 681 - -
Car03g02378 682 SMART WD40_4 49 86 IPR001680 GO:0005515
Car03g02378 682 SMART WD40_4 7 46 IPR001680 GO:0005515
Car03g02378 682 SMART WD40_4 617 657 IPR001680 GO:0005515
Car03g02378 682 MobiDBLite consensus disorder prediction 232 253 - -
Car03g02378 682 SUPERFAMILY WD40 repeat-like 13 122 IPR036322 GO:0005515
Car03g02378 682 MobiDBLite consensus disorder prediction 232 254 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02378 Car-Chr3 69697908 69705632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02378 - K17985 gmx:100817857 1145.18
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02378 03 69697908 69705632 Car03g02378 03 69697908 69705632 ECH