Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02377 ATGGCTTCAAATTCAAATCTTAGAATCACCATTGAAAGAAATCCTTCTCAATCACGTTTAGCTGAATTGAATATCAAGTGTTGGCCCAAATGGGGGTGTTCACCAGGAAAGTACCAATTGAAATTTGATGCAGAAGAGACATGCTATTTATTGAAAGGGAAAGTGAAAGCATACACAAAAGGGTCATCAGATTTTGTAGAGTTTGGAGCTGGAGACCTTGTCACCATTCCAAAAGGACTTAGTTGTACTTGGGATGTTTCTATTGCTGTTGACAAGTACTATAAATTTGAatcatcttcttcctcatcatcatcaccatcTTGTTAA 327 0.3333 MASNSNLRITIERNPSQSRLAELNIKCWPKWGCSPGKYQLKFDAEETCYLLKGKVKAYTKGSSDFVEFGAGDLVTIPKGLSCTWDVSIAVDKYYKFESSSSSSSSPSC 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02377 108 Pfam EutQ-like cupin domain 21 94 IPR008579 -
Car03g02377 108 Gene3D Jelly Rolls 1 96 IPR014710 -
Car03g02377 108 PANTHER RMLC-LIKE JELLY ROLL PROTEIN-RELATED 4 103 - -
Car03g02377 108 CDD cupin_TM1112-like 28 96 - -
Car03g02377 108 PANTHER OS04G0445200 PROTEIN 4 103 - -
Car03g02377 108 SUPERFAMILY RmlC-like cupins 18 86 IPR011051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02377 Car-Chr3 69694318 69694772 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02377 - - gmx:100793722 197.593
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02377 03 69694318 69694772 Car03g02377 03 69694318 69694772 ECH
Car03g02377 03 69694318 69694772 Car04g00065 04 699670 700703 PCT