Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02371 ATGGAGGATGAAGGTGAAATATACGACGGTACTCGAGCACAATTCCCTCTTTCCTTTGGTAAGCAATCCAAATCTCAAACCCCTCTTGAAACCATTCACAACGCTACTCGTCGTCCACCTTCTGCTCCCAACGATTTTCCTTCTATTTCTTCCTCTTCCAAGGAATGGCTTCATTCCCTCCGTCCCCCCAAAAACCCTACCCCTCCTCCTTCTTCTCCGCCTCTCAAACAAGATTCCCCCCTCGTCGGACCCCCTCCACCACCGCCTCATAATGAAGACGATGACGGCGAGATGATTGGCCCTCCTCCTCCGCCATCTGGTTCCAATTTGGACGACTCCGACTCCGAAGACGATTCTGATCAAGATCAACTTGGTAACCGCTTTCGTATTCCTCTTAGCAACGAGATTGCCCTCAAGGGTCATACAAAGGTTGTGTCAGCTCTTGCAGTGGATCACTCAGGGTCCAGAGTACTATCTGGAAGTTATGACTATATGATTCGTATGTATGACTTTCAAGGAATGAATTCTCGTTTGCAATCCTTTCGACAACTCGAGCCATCTGAAGGGCACCAAATTCGTAATTTAAGCTGGAGTCCAACTGCTGATCGCTTTTTGTGTGTGACCGGATCAGCTCAAGCTAAGATTTATGATCGTGATGGCCTTACTCTAGGTGAGTTTGTAAAGGGTGACATGTATATTCGTGATCTAAAGAATACCAAGGGCCATATAACTGGATTGACATGTGGAGAGTGGCACCCAAAAACTAAGGAGACCATTTTAACGTCATCAGAGGATGGTTCGCTACGCATATGGGATGTTAATGACTTCACGAGTCAGAAGCAGGTCATTAAACCAAAGCTTGCGAGACCTGGAAGAGTTCCCGTCACCACATGTGCATGGGATCATGATGGCAAATGCATTGCTGGTGGTATAGGAGATGGTTCTATACAGATTTGGAGTATTAAACCCGGATGGGGGAGTAGGCCTGATGTACATATTCAAAAATGTCATGAGGATGATATTACTAGTCTGAAATTTTCTAGTGATGGGAGAATCTTATTGTCAAGGAGCTGTGATGATTCATTGAAGGTTTGGGATCTTCGCAAAACAAAGGAAGCACTAAAGGTGTTTGATGAACTGCCAAACCACTATGGACAAACAAATATTGGCTTCAGTCCTGACGAGCAACTCTTTTTTACTGGAACATCTGTAGAAAGGGATAGCTCAACAGGAGGTTTGTTATGCTTCTTTGATAGAGAAAATCTTGAGCTTGTTTCAAAAGTTGGCATATCCCCCACTTGCAGTGTTGTTCGGTGTTTTTGGCATCCTAAACTGAATCAGATATTTGCCACTGTTGGTGATAAAAGCCAAGGAGGGACTCACATACTATATGATCCAAACATCAGTGAGAAAGGAGCTCTTGTTTGTGTTGCACGTGCACCAAGGAAAAAATCAATTGATGACTTTGAAGCAAATCCTGTAATTCACAATCCCCATGCTCTACCGCTCTTTAGAGATCAGCCAAGCCGCAAGCGTCAGCGGGAGAAGGTATTAAAGGATCCATTGAAGTCCCATAAACCTGAACTACCCATGACAGGACCTGGCTTTGGTGGACGAGTTGGTACAAGTCAAGGAAGCTTACTGACCCAGTATCTTCTAAAGAAAGGAGGTATGATTAAGGAGACATGGATGGAGGAAGATCCAAGGGAAGCTATCCTAAAATATGCTGATGTTGCAGCAAAGGAACCAAAGTTCATAGCTCCAGCATATGCTGAAACTCAACCTGAGCCAGTGTTTGCCAAATCAGATTCTGAAGATGAAGAGAAATGA 1830 0.4454 MEDEGEIYDGTRAQFPLSFGKQSKSQTPLETIHNATRRPPSAPNDFPSISSSSKEWLHSLRPPKNPTPPPSSPPLKQDSPLVGPPPPPPHNEDDDGEMIGPPPPPSGSNLDDSDSEDDSDQDQLGNRFRIPLSNEIALKGHTKVVSALAVDHSGSRVLSGSYDYMIRMYDFQGMNSRLQSFRQLEPSEGHQIRNLSWSPTADRFLCVTGSAQAKIYDRDGLTLGEFVKGDMYIRDLKNTKGHITGLTCGEWHPKTKETILTSSEDGSLRIWDVNDFTSQKQVIKPKLARPGRVPVTTCAWDHDGKCIAGGIGDGSIQIWSIKPGWGSRPDVHIQKCHEDDITSLKFSSDGRILLSRSCDDSLKVWDLRKTKEALKVFDELPNHYGQTNIGFSPDEQLFFTGTSVERDSSTGGLLCFFDRENLELVSKVGISPTCSVVRCFWHPKLNQIFATVGDKSQGGTHILYDPNISEKGALVCVARAPRKKSIDDFEANPVIHNPHALPLFRDQPSRKRQREKVLKDPLKSHKPELPMTGPGFGGRVGTSQGSLLTQYLLKKGGMIKETWMEEDPREAILKYADVAAKEPKFIAPAYAETQPEPVFAKSDSEDEEK 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02371 609 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 138 172 - -
Car03g02371 609 MobiDBLite consensus disorder prediction 507 526 - -
Car03g02371 609 MobiDBLite consensus disorder prediction 62 89 - -
Car03g02371 609 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 239 274 - -
Car03g02371 609 Pfam WD domain, G-beta repeat 138 170 IPR001680 GO:0005515
Car03g02371 609 Pfam WD domain, G-beta repeat 237 272 IPR001680 GO:0005515
Car03g02371 609 Pfam WD domain, G-beta repeat 294 320 IPR001680 GO:0005515
Car03g02371 609 Pfam WD domain, G-beta repeat 332 366 IPR001680 GO:0005515
Car03g02371 609 PRINTS G protein beta WD-40 repeat signature 259 273 IPR020472 -
Car03g02371 609 PRINTS G protein beta WD-40 repeat signature 307 321 IPR020472 -
Car03g02371 609 PRINTS G protein beta WD-40 repeat signature 353 367 IPR020472 -
Car03g02371 609 ProSiteProfiles Trp-Asp (WD) repeats profile. 239 281 IPR001680 GO:0005515
Car03g02371 609 Gene3D - 90 227 IPR015943 GO:0005515
Car03g02371 609 Gene3D - 228 469 IPR015943 GO:0005515
Car03g02371 609 MobiDBLite consensus disorder prediction 16 58 - -
Car03g02371 609 SMART WD40_4 131 170 IPR001680 GO:0005515
Car03g02371 609 SMART WD40_4 276 320 IPR001680 GO:0005515
Car03g02371 609 SMART WD40_4 327 366 IPR001680 GO:0005515
Car03g02371 609 SMART WD40_4 177 217 IPR001680 GO:0005515
Car03g02371 609 SMART WD40_4 229 272 IPR001680 GO:0005515
Car03g02371 609 MobiDBLite consensus disorder prediction 507 537 - -
Car03g02371 609 MobiDBLite consensus disorder prediction 587 609 - -
Car03g02371 609 PANTHER GASTRULATION DEFECTIVE PROTEIN 1-RELATED 2 609 - -
Car03g02371 609 ProSiteProfiles Trp-Asp (WD) repeats circular profile. 334 368 - -
Car03g02371 609 ProSiteProfiles Trp-Asp (WD) repeats profile. 334 375 IPR001680 GO:0005515
Car03g02371 609 SUPERFAMILY WD40 repeat-like 115 454 IPR036322 GO:0005515
Car03g02371 609 ProSitePatterns Trp-Asp (WD) repeats signature. 259 273 IPR019775 -
Car03g02371 609 ProSiteProfiles Trp-Asp (WD) repeats profile. 138 179 IPR001680 GO:0005515
Car03g02371 609 MobiDBLite consensus disorder prediction 1 125 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02371 259 440 Miscellaneous Gene Families AT5G08390 26.776 1.42e-10 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02371 K24752 - gmx:100815380 1071.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02371 03 69645168 69649101 Car03g02371 03 69645168 69649101 ECH