Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02370 ATGGAGAGTATTGGTAGGAGCAGTTTCAGTTTGAGTGTTGGTTCGGATAATGTCTTCCCTAACTATGTCAATAGGGAAGACAATGATGATGAAGAGGCTTTGAAATGGGCTGCAATTCAAAGGCTTCCAACTGTTGCACGTTTGAGGAGAGGTTTGTTGATTACCTCTAAAGGAGAGACTAATGAAATTGATGTGCAAAAACTTGGGTTACAAGAAAGGAAATTTTTGTTAGAAAGACTATTGAGAATTGTTGATGTTGACAATGAGAAATTCTTGTTCAAGCTCAGAGATCGCATTGATCGAGTTGGAATTGAGATTCCTACCGTCGAAGTTCGATTTGAGAACTTGAAGATTGAAACAGATGTTCATGTAGGAAAGAGAGCTTTACCAACCCTCACTAATTACACTCTTGATATGGTAGAGGCTCCATTCAACTCTATACTAAGAAGAAAAAGACAACATGTGAATATTCTTCAGGATGTTAGTGGAATAATTAAGCCTGGCAGgataacattgcttttgggccctccaagctctggaaaaaccacactcctcttggccttggctggaaaacttgatcccaatttaaagttcgctggaaaagtgagttacaatggtcatgggatgaatgagtttgtaccccaaagaacttctgcttatgtcagtcaaaatgatgttcatcttggagaattgactgtcagagaaaccttggctttctcAGCAAGAGTTCAAGGCGTTGGACCTCAATACGATATATTAGCAGAGGTGTGTAGAAGAGAGAAAGAGGAAAACATTATCCCTGATTCAGATATTGATGTCTACATGAAGgctgttgcaactgaaggccagaaagaaaatattgtagtagattatattctaaaggttttgggattggagatatgttcagatactgtggtgggaaatgatatgttaagaggcatttctggaggacaaagaaaacgtgttacaacaggggagatgctggtaggaccaactaaagttcttttcatggatgaaatatctactggtttggatagctcaacaacttttcaagttgtgaaatcagtgaagcagtatgtccactttctcaagggaactgctgtgatctcactcttgcagccaccaccggagacttacgatcttttcaacgacattattctactctctgatgggcatattgtgtaccagggtccctgtgagcacgtgcttgattttttttcctcaatgggtttcatttgccctgagaggaaagctgtggcagactttttacaagaagtgacatcagtgaaagatcaggaacaatattggatacaaaatgaaaagcattatagatttgtgacacctaaagagtttgcagaagcatttcagtcatttcatgttgggagaagccttgctaacgaacttgatactcaatttgacaagtctaaaagccacccagctgctttgacaaccaacaagtatggaattggaaaactggaattgttcaaagcttgcttatcaagagaatatctactcatgaaacgcaattcatttttatatatcttcaaactttgccaaattgctgtggtggccacaattaccatgactgttttcctccggaccgaaatgcaccatggttcagtgactgatggaaacatttatgcaggtgcactgttctttggaaatatgataatcatgtttaatggactttctgaacttgacatgacagtcattaaccttcctgttttctacaaacaaagaggtcttcttttcttccctgcttgggcgtatgctcttccttcatggatcctaaaaatccccgtgattgttttggaagtagctgtttggacattcctcacttattttgtcattggttatgatcctgaagttggaagattctttaggcaactccttgttctagctgctgttaatcaaatgggatattcgttattccggttcattggagcagttggaagggatatgacactggctgcaacactagggtcgtttgcattggccttgttggttgtcatgagtggtttttcactctcaaaagatgatatagaaaaaggatggatatggggcttttgggtatcacctatgatgtatgcacaaaatgctgtagtgaataacgagttcttaggaaagacttggagacatgttcttcctaactcaacggaagtgctaggagtcgacgttttgaaatcgcgcgggttctttgctacgcctgattggtattggataggttttggggcattgattggatatacattagtgttcaactttggttaccttcttgctctcactttcttgaattCACTTGAGAAGCATCAGGGTGTAAAAGCAGAGCAAActctaagaaatgaggagaatagtggaagaaaaaaaggaatgattcttcctttTGAACCACATTGTATCACATTTGATGAAGTAACATATTCTGTTGACATGCCTCAGgaaatgaggaatcaaggtgtccatgaggataaattggttcttttgaaaggagtcagcggatcttttcggccaggtgttctcactgcacttatgggtgtcactggtgccggcaaaacaactatgatggatgtacttgctggaagaaagaatggaggatatataactgggaacatcacaatttctggatatccaaagaagcaagaaacatttgcaagaatttcaggctactgtgagcaaaatgatattcactctcctcatgttactgtgtatgaatccttgctctattcagcatggcttcgattgcctgcagaaatcgatgtagaaacaaggaagatgttcgtcgaggaagtcatggagcttgtggagctaaatccactccgggacgctattgttggattgccaggtgttagtggtctatcgaccgagcaacgcaaaagaacaatcgtttgcaccattcatcaaccaagcattgatatatttgaatcttttgatgagcttttcctattgaagcaaggaggacaagagatatatgtggggccacttggacatcattctgttcatttaattaattacttagagcaaattcaaggtgtaagtaagattaaaaatggatataatccagcaacttggatgatggaagtcactaattcagctaaagaaatggaattggatattgattttgctgaggtgtacaataattcagaattatacaggagaaacaaagctcttattaaagaattgagcactccacttcctggtacaaaggaactttattttccttcaaagtactcaaggtccttttcaattcaatttatggcttgtttatggaaacaacatcagtcttactggcgcaatccgttgtacaatgccataaggtttctcttcacaactgctgcctctgtgttgttagggagcatgttctggaaCTTTGGCTCCAAAATtgaaaagcaacaagatttctttaattcaatgggttttatgtatactgctagtatacttattggtgtcaagaattgtttctcggtgcaaccagtggtaggtgtagagagaatagttctttacagagaaagggctgcaggaatgtattcttccatggcttatgctgcttctcagGCTTTAATTGAAGTCCCTTATAGTCTTGTTCAAGCTGTGGTTTATGGAATAATTGTTTATACAATGATTGGTTATGAGAGGAGTGCTACAAAACTTTTTTGGTACATATTTTTCATGTTTTTCAATTTCCTCTTCTTTACCTATCTTGGCATGATGGCTACAGCCATGACCCCAAATCTACCCATAGCTGGTttaatcagtggtgcgttcatgacatcatggaatctcttctcaGGATTCCTAATCCCACAACCAagaattcctatatggtggagatgTTTCTCGGACACTGTTCTGGAAGTTTCCGACGACTATTCAACATTTCAAGTCCAATCCGACTTTTTCGGGTTACTTTCTTGGTGA 3915 0.1004 MESIGRSSFSLSVGSDNVFPNYVNREDNDDEEALKWAAIQRLPTVARLRRGLLITSKGETNEIDVQKLGLQERKFLLERLLRIVDVDNEKFLFKLRDRIDRVGIEIPTVEVRFENLKIETDVHVGKRALPTLTNYTLDMVEAPFNSILRRKRQHVNILQDVSGIIKPGRITLLLGPPSSGKTTLLLALAGKLDPNLKFAGKVSYNGHGMNEFVPQRTSAYVSQNDVHLGELTVRETLAFSARVQGVGPQYDILAEVCRREKEENIIPDSDIDVYMKAVATEGQKENIVVDYILKVLGLEICSDTVVGNDMLRGISGGQRKRVTTGEMLVGPTKVLFMDEISTGLDSSTTFQVVKSVKQYVHFLKGTAVISLLQPPPETYDLFNDIILLSDGHIVYQGPCEHVLDFFSSMGFICPERKAVADFLQEVTSVKDQEQYWIQNEKHYRFVTPKEFAEAFQSFHVGRSLANELDTQFDKSKSHPAALTTNKYGIGKLELFKACLSREYLLMKRNSFLYIFKLCQIAVVATITMTVFLRTEMHHGSVTDGNIYAGALFFGNMIIMFNGLSELDMTVINLPVFYKQRGLLFFPAWAYALPSWILKIPVIVLEVAVWTFLTYFVIGYDPEVGRFFRQLLVLAAVNQMGYSLFRFIGAVGRDMTLAATLGSFALALLVVMSGFSLSKDDIEKGWIWGFWVSPMMYAQNAVVNNEFLGKTWRHVLPNSTEVLGVDVLKSRGFFATPDWYWIGFGALIGYTLVFNFGYLLALTFLNSLEKHQGVKAEQTLRNEENSGRKKGMILPFEPHCITFDEVTYSVDMPQEMRNQGVHEDKLVLLKGVSGSFRPGVLTALMGVTGAGKTTMMDVLAGRKNGGYITGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLPAEIDVETRKMFVEEVMELVELNPLRDAIVGLPGVSGLSTEQRKRTIVCTIHQPSIDIFESFDELFLLKQGGQEIYVGPLGHHSVHLINYLEQIQGVSKIKNGYNPATWMMEVTNSAKEMELDIDFAEVYNNSELYRRNKALIKELSTPLPGTKELYFPSKYSRSFSIQFMACLWKQHQSYWRNPLYNAIRFLFTTAASVLLGSMFWNFGSKIEKQQDFFNSMGFMYTASILIGVKNCFSVQPVVGVERIVLYRERAAGMYSSMAYAASQALIEVPYSLVQAVVYGIIVYTMIGYERSATKLFWYIFFMFFNFLFFTYLGMMATAMTPNLPIAGLISGAFMTSWNLFSGFLIPQPRIPIWWRCFSDTVLEVSDDYSTFQVQSDFFGLLSW 1304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02370 1304 Pfam ABC-2 type transporter 373 426 IPR043926 GO:0140359
Car03g02370 1304 SMART AAA_5 837 986 IPR003593 -
Car03g02370 1304 SMART AAA_5 167 399 IPR003593 -
Car03g02370 1304 Pfam ABC transporter 158 340 IPR003439 GO:0005524
Car03g02370 1304 PANTHER ATP-BINDING CASSETTE TRANSPORTER 959 1279 - -
Car03g02370 1304 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 142 415 IPR003439 GO:0005524
Car03g02370 1304 PANTHER ATP-BINDING CASSETTE TRANSPORTER 7 959 - -
Car03g02370 1304 Gene3D - 800 973 IPR027417 -
Car03g02370 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 153 415 IPR027417 -
Car03g02370 1304 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 7 959 - -
Car03g02370 1304 CDD ABCG_PDR_domain1 139 397 IPR034001 -
Car03g02370 1304 Pfam ABC transporter 828 963 IPR003439 GO:0005524
Car03g02370 1304 Pfam ABC-2 type transporter 1083 1279 IPR013525 GO:0016020|GO:0140359
Car03g02370 1304 Pfam ABC-2 type transporter 494 706 IPR013525 GO:0016020|GO:0140359
Car03g02370 1304 Pfam ABC-transporter N-terminal 86 134 IPR029481 -
Car03g02370 1304 Gene3D - 145 455 IPR027417 -
Car03g02370 1304 Pfam Plant PDR ABC transporter associated 711 772 IPR013581 -
Car03g02370 1304 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 959 1279 - -
Car03g02370 1304 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 815 966 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02370 Car-Chr3 69630885 69641263 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02370 K08711 - gmx:100813417 1818.9