Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02359 ATGGCGTCTTCGTACCAGGGGTCCGTTAGTGCTGCTCAGGTTGGTTCTTACTTCGTGGGACAGTACTATCAAGTTCTTCGTCAACAACCTGATCTTGTTCATCAGTTTTACTCTGATTCCAGCTCCATGATTCGTGTTGATGGTGATTATACTGAGACCGCACCCGATGTGTTGCAAATTCACAACATTGTGACGTCGCTGAACTTTTCTACAATTGAGATCAAGACGATCAATTCTCTTGACTCTTGGGATGGAGGAGTGCTTGTAATGGTTTCGGGTGTTGTTAAAATCAAGGACGTCAACATGAGACGGAAGTTTGTTCAATCATTCTTCCTTGCCCCACAGGAGAAGGGTTATTTTGTACTCAATGATATATTTCAATTCGTTGACGATGATGTAGTGCATCCAAATTTTGTACCTGCGGCATCTGAAAAGATTGACTTGCAGCCACATGTATCTGCTTTGTTTCCTGAGCCATCAGATACAGTGATTCCAGCTTTGGACTATGGTTTGGAGGAAGAAGCCAGGGAGTATGTCAATTCAGTTCATATAGATGATGATCCAGTGGACAAGTACAGTCTTCCTGAGCAGCAACACCAACTACAAGAAGATCTCGAGACCGAAGTTGTGGTGGAGGAAACTCCTGCACAAGAAGCATCTCCACCAGTGCATAATGCTTCACATACTATCCGTGAAACGCCTATTGCTCTTTTGGAAGAGTCTTTTGAGGAGCCAGCTAAGAAAACTTATGCATCTATTTTACGCGTCTCTAAAGGCGAAACAGTGTTGTCAGCTGCTCCCCAACATGCCCCAAAGCATTCTTTTAAAAGTGCTCCTCCATCAGAGCTTAATCATGTGGCGCAGCCTGCTGTTCAGCAATCAGTCGCACAGCCTGCATTTCAGCAGTCAACCCCAGCATCCGCGTATGTTTCTGAGTCTGGGGGAGAAGCAGCAGAAGAAGGCTACAGATTTGAAGAAGATGAAGTGACATCCGTCTATGTGAGAAACCTGCCTGCTGATATTACCGAAGCTGAGATTGACCAGGAATTTAAGAATTTTGGGAGAATTAAGCCGGATGGAATATTTGTAAGGGTCCGACAGGAAATTGGTGTTTGCTACGCATTTGTGGAATTCGAAGACATTGTTGGTGTTCAAAATGCGCTACAGGCGTCTCCCATACAATTGGCTGGAAGACCAATATACATAGAGGAGCGAAGACCAAGCAGTAGCAGTGCCGTTCGAGGAGGAAGAGGAAGGGGAAGAGGCAGAGGTGGTTATCAAACAGATGCTCCAAGAGGGCGTTTTGGTGGTAGGAGCTCGGGAAGGGGAAATTTTCAGGATACTTCAGACTATACCAGACCAAGAGGCGATGGTTATCTTCAGCGTGGTTCACGATAA 1398 0.4549 MASSYQGSVSAAQVGSYFVGQYYQVLRQQPDLVHQFYSDSSSMIRVDGDYTETAPDVLQIHNIVTSLNFSTIEIKTINSLDSWDGGVLVMVSGVVKIKDVNMRRKFVQSFFLAPQEKGYFVLNDIFQFVDDDVVHPNFVPAASEKIDLQPHVSALFPEPSDTVIPALDYGLEEEAREYVNSVHIDDDPVDKYSLPEQQHQLQEDLETEVVVEETPAQEASPPVHNASHTIRETPIALLEESFEEPAKKTYASILRVSKGETVLSAAPQHAPKHSFKSAPPSELNHVAQPAVQQSVAQPAFQQSTPASAYVSESGGEAAEEGYRFEEDEVTSVYVRNLPADITEAEIDQEFKNFGRIKPDGIFVRVRQEIGVCYAFVEFEDIVGVQNALQASPIQLAGRPIYIEERRPSSSSAVRGGRGRGRGRGGYQTDAPRGRFGGRSSGRGNFQDTSDYTRPRGDGYLQRGSR 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02359 465 PANTHER GB|AAD20086.1 9 459 - -
Car03g02359 465 PANTHER RAS GTPASE-ACTIVATING PROTEIN-BINDING PROTEIN 9 459 IPR039539 -
Car03g02359 465 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 330 407 IPR000504 GO:0003723
Car03g02359 465 Pfam Nuclear transport factor 2 (NTF2) domain 14 128 IPR002075 -
Car03g02359 465 Gene3D - 310 459 IPR012677 -
Car03g02359 465 SUPERFAMILY RNA-binding domain, RBD 325 437 IPR035979 GO:0003676
Car03g02359 465 SUPERFAMILY NTF2-like 10 131 IPR032710 -
Car03g02359 465 CDD RRM_SF 332 403 - -
Car03g02359 465 Gene3D - 3 132 - -
Car03g02359 465 MobiDBLite consensus disorder prediction 406 465 - -
Car03g02359 465 ProSiteProfiles Nuclear transport factor 2 domain profile. 14 128 IPR018222 -
Car03g02359 465 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 332 399 IPR000504 GO:0003723
Car03g02359 465 SMART rrm1_1 331 403 IPR000504 GO:0003723
Car03g02359 465 CDD NTF2 10 130 IPR018222 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02359 Car-Chr3 69517195 69523131 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02359 - - cam:101501784 845.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02359 03 69517195 69523131 Car03g02359 03 69517195 69523131 ECH