Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02358 ATGAAAAATAATTGCCTAATCTACACCACACAACAAATCAAAAAACATAACAATTTGTTTCAATCTCATCATTATCCATCATCAACGGCCTCAGATATAATAAGAGCATCACTTGCCATAGAGCCGCAAACACCCACATCCAACGATATATTCATAAGACCACCTCAAACTCTCGGTGCCCTACTTCGCAAATTATCAAGATTTACCACCAAAAACATTCATTCATTAGAACCGACCACTATTTCATTTTTGAGTTTTTCATTGAAGTTAAAGGCGTATCCACCGGCGGGATACAACAACACCGTCTCAAATCCTGTTAACGAGGCTGGTGCTACCGTTGAGATTTCCGGAGAAGCTGCCGCTCAGGCCAATTCAAGCTATGAATTTGCTTATTCTGGTGATGGGAATGCGTATGCTGCCGGCGATCCTAATTCGGTTCTACAACAAGCTCAATTTGGTGCAACGAATGAATCCAAGCAAGGTGCTGGAGTGCCGGACGCTAATGAGGCCTCTGGTGTGTCGGGAAAGGAAGCTATGGAGTCTGCCATGGTTTCTGGTGATCATTCGACTGTAAATGGCGGTGTTGGTTCAGTTGGACTTGAAAATGGAAATGCATTGGAGAATGTTGATGGGTCAGATGATAAACAACTTACAGATGCTTACGCTGCCTTGTCTGCTGAAGAAGATCGACTGTGGAATATTGTAACAGCTAATTCTTCAGATTTTACTGCTTGGACGTCTTTGATTGAAGAGACAGAGAAGGTGGCTGAGAACAACATTTTGAAGATTCGTAGAGTCTATGATGCTTTCCTAGCAGAATTCCCCTTGTGTTATGGGTATTGGAAGAAATATGCCGACCATGAGGCGCGCCTTGGCTCTGTTGATAAAGTTGTTGAAGTTTATGAACGTGCTGTTCAAGGGGTTACTTATTCAGTGGACATGTGGTTGCATTATTGTATATTTGCTATAAGCACGTATGGGGATCCAGACACAGTTCGTAGGCTTTTTGAACGAGGATTAGCTTATGTTGGAACAGATTATCTTTCGTTTCCTCTTTGGGATAAATACATTGAGTATGAGTACATTCAGCAAGACTGGGCTCGCCTTGCCTTGATCTATACCAGAATATTAGAGAATCCAAATCAGCAGTTGGATCGGTATTTCAGCAGCTTCAAGGAGTTGGCTAGTAATCGACCTTTGTCAGAATTAAGGACAGCTGACGAAGCTGCTGCAGTGGCTGATGTTGTTTCAGAGGGTACTGGCCAAGCTGTTGAAGGAGAGGTTCGTCCTGATGGTGCAGAGAATTCTCCCAAACCTGTAAGTGCTGGATTAACAGAAGCAGAAGAGTTGGAGAAGTATATCGGCATTAGAGAAGAGATGTTTAAGAAAGCTAAAGAGTTCGATTCCAAGATCATTGGTTTTGAAACAGCTATCAGGAGGCCCTACTTTCATGTACGGCCCCTTAATATTGGGGAGCTTGAGAATTGGCACAACTATCTTGACTTCATAGAAAGAGAAGGTGACTTGAGCAAGATTGTCAAGTTGTATGAGAGATGTGTCATTGCCTGTGCCAACTACCCTGAGTACTGGATACGCTATGTTTTGTGTATGGAAGCTAGTGAAAGTATGGATCTTGCAAATAACGTTCTTGCTCGGGCGAGCCAAGTCTTTGTCAAGAGACAACCAGAGATACATCTTTTTTGTGCTCGGTTCAGGGAGCAGGCCGGTGATCTAGTGGGTGCTAGGGCTGCGTATCAACTTGTGCACACTGAAATTTCTCCAGGTCTTCTTGAAGCAATAATAAGGCATGGCAATATGGAATATCGATTGGGGAAGTTGGAAGATGCCTTCTCATTGTATGAACAGGCCATTGCCATTGAGAAAGGAAAAGAACATTCACAAACACTGCCAATGTTGTTCGCTCAGTATTCTCGATTTGTTTATTTGGCCTCTGGCAATGCAGAAAAAGCTAGAGAGATTTTAGTTGGGGGGCTTGATAATGCTACGCTGTCAAAGCCACTACTTGAGGCTTTATTGCATTTTGAGGCTATTCAACCCCAACCAAAGCGAGTTGATATTGACTTTCTAGAGTCATTGGTTGTCAAATTCGTTACGCCCAACCCAGAGAGCCACAGTGTAGCAAGTGCAACAGAGCGTGAGGAACTTTCTAGCATTTTTCTGGAGTTTTTAAATCTCTTTGGTGATGTTCAATCTATCAAGAGGGGTGAAGATAGGCATGCCAAACTGTTCCTTCCACACAGAAGCATGTCGGAGTTGAAAAAACGTCATGCAGAGGATTTCTTAGCTTCAGATAAAACTAAAGTGCCGAGAGCTTATTCTGCCCAATCACCTGCCCAGTCTCTAATGGGTGCATATCCAAATGCACCTAATCAATGGACTAACTATGGAGCACAGCCTCAAACTTGGCCGGCGGCCACACAAGCACAAGCACAACAATGGCCTGCTGGTTACACCCAACAGGCTTCCTATGGCGCTTATGCTGGATATGGAGGCAACTATGCTAACCCACAAGTGCCTACATCGGTTCCACCAAGCACTGCTGCATACGGAGCCTATCCTCCTGCATATCCCGCACAGCCGGCACTGCCTCAACAAAATTATGCACAACCTGTTGCAGCCCCGACACAGCAACCCGCAGCAGTTCCTCAGGCCTATTACGGAAGTTACTACTAA 2694 0.4428 MKNNCLIYTTQQIKKHNNLFQSHHYPSSTASDIIRASLAIEPQTPTSNDIFIRPPQTLGALLRKLSRFTTKNIHSLEPTTISFLSFSLKLKAYPPAGYNNTVSNPVNEAGATVEISGEAAAQANSSYEFAYSGDGNAYAAGDPNSVLQQAQFGATNESKQGAGVPDANEASGVSGKEAMESAMVSGDHSTVNGGVGSVGLENGNALENVDGSDDKQLTDAYAALSAEEDRLWNIVTANSSDFTAWTSLIEETEKVAENNILKIRRVYDAFLAEFPLCYGYWKKYADHEARLGSVDKVVEVYERAVQGVTYSVDMWLHYCIFAISTYGDPDTVRRLFERGLAYVGTDYLSFPLWDKYIEYEYIQQDWARLALIYTRILENPNQQLDRYFSSFKELASNRPLSELRTADEAAAVADVVSEGTGQAVEGEVRPDGAENSPKPVSAGLTEAEELEKYIGIREEMFKKAKEFDSKIIGFETAIRRPYFHVRPLNIGELENWHNYLDFIEREGDLSKIVKLYERCVIACANYPEYWIRYVLCMEASESMDLANNVLARASQVFVKRQPEIHLFCARFREQAGDLVGARAAYQLVHTEISPGLLEAIIRHGNMEYRLGKLEDAFSLYEQAIAIEKGKEHSQTLPMLFAQYSRFVYLASGNAEKAREILVGGLDNATLSKPLLEALLHFEAIQPQPKRVDIDFLESLVVKFVTPNPESHSVASATEREELSSIFLEFLNLFGDVQSIKRGEDRHAKLFLPHRSMSELKKRHAEDFLASDKTKVPRAYSAQSPAQSLMGAYPNAPNQWTNYGAQPQTWPAATQAQAQQWPAGYTQQASYGAYAGYGGNYANPQVPTSVPPSTAAYGAYPPAYPAQPALPQQNYAQPVAAPTQQPAAVPQAYYGSYY 897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02358 897 MobiDBLite consensus disorder prediction 155 174 - -
Car03g02358 897 ProSiteProfiles TPR repeat profile. 597 630 IPR019734 GO:0005515
Car03g02358 897 MobiDBLite consensus disorder prediction 421 441 - -
Car03g02358 897 Gene3D Tetratricopeptide repeat domain 233 402 IPR011990 GO:0005515
Car03g02358 897 PANTHER PRE-MRNA-PROCESSING FACTOR 39 183 884 - -
Car03g02358 897 SUPERFAMILY TPR-like 235 397 IPR011990 GO:0005515
Car03g02358 897 SMART hat_new_1 292 324 IPR003107 GO:0006396
Car03g02358 897 SMART hat_new_1 507 539 IPR003107 GO:0006396
Car03g02358 897 SMART hat_new_1 364 397 IPR003107 GO:0006396
Car03g02358 897 SMART hat_new_1 258 290 IPR003107 GO:0006396
Car03g02358 897 SMART hat_new_1 327 362 IPR003107 GO:0006396
Car03g02358 897 SMART hat_new_1 611 646 IPR003107 GO:0006396
Car03g02358 897 PANTHER PRE-MRNA PROCESSING PROTEIN PRP39-RELATED 183 884 - -
Car03g02358 897 Gene3D Tetratricopeptide repeat domain 487 787 IPR011990 GO:0005515
Car03g02358 897 SUPERFAMILY TPR-like 453 754 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02358 Car-Chr3 69505635 69515547 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02358 K13217 - gmx:100787373 1264.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02358 03 69505635 69515547 Car03g02358 03 69505635 69515547 ECH