Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02351 ATGGAAGTCATTGAAGAAAAAGGGCAATTAGAAGAAGATTACACTCAAGATGGCACGGTAGACTTACAAGGTAGACCTGTTTTAAGATCAAAAACTGGAAGGTGGAAAGCTTGCTACTTCCTTGTAGGGTATGAATTGTTTGAGAGGATGGCTTATTATGGAATATCAACAAACTTAGTGGTGTATCTAACAAATAAGTTCCATCAAGGTACTGTGGAAGCTTCAAACAATATTAGTAATTGGGGAGGATCGGTGTGGATTATGCCACTTGCAGGAGCTTACGTAGCTGATACTTATCTTGGTCGATATTGGACTTTTGTATTTGCTTCGTGCATTTATCTTGTGGGAATGTGTTTGTTGACTCTATCAGTTTCATTACCATCATTAAGACCACCAAATTGTGATGTAGGCGTCAAATTCCAAAATTGCCCCAAGGCATCACCGTTGCAAAAAGGAATTTTCTTTTTTGCCTTGTACATCATTGTTTTAGGTACCGGGGGAACCAAACCCAACATTTCTACAATGGGAGCAGACCAATTTGATGACTTTGATCCTAGAGAGAAATCTCATAAACTTTCCTTCTTTAATTGGTGGTACTTTACCATTTTGATAGGTGTCCTTTTTTCTACCACTTTATTTGTTTACATACAAGATAATATAGGTTGGACCCTTGGATATGGTCTTCCAACCATTGGGCTCGCATTTTCAATCTTCGTGTTTCTATTAGGCACACCACTTTATAGACACAAGTTGCCTCCAGGGAGCCCTATAACTAGAATGCTTCAAGTATTTGTGGCTGCTATGAGAAAATGGAAGTTACGTGTCCCAGAAGATACAAAAGAGCTACATGAGTTGAGTATGGAGGAGTATGCATGTAATGGTAGAATTAGAATTGCTCACACCTCTTTCTTAAGTTTCCTTGATAAAGCAGCTATAAAGACCGGACAAAACTCATCATGGATGCTTTGTACAGTGACACAAATTGAGGAAACTAAACAAATGTCAAAACTGATTCCTGTTTTGATTTTCTCAATTATTCCATGCACTTTTGGAATGCACATTGGCACACTCTTTATTAAACAAGGCATGACGTTAGACAAAAGAATGGGACCTCATTTTAATGTCTCTCCTGCAAGTCTCTCAGCATTTACAATTATCTTCATGATGATAGGAATTTCTGATAACTTTCTTGAGATTGCCATGATGGAGTTCTTCTACGACCAAGCACCAGAAAATATGAAAAGCCTCGGAACAGCATGTTCTACAGCCACCTATGGTTTAGGAGGTTTTCTCAGCACTTTTATTCTATCAGCGGTTGCTGATATCACCCAAAGACATGGTCGTAGTGGTTGGATTTTGGATAATATAAATGTCTCCCATTTAGATTATTATTATGCATTTGTTGCAGCATTAAACATCCTCAACTTCCTTGGCTTTGTGGTTGTTGCCAAGTTCTTTGTATATAATGATGTAAAACTAAGCAAATCAGGTTTGGAGATGCACGCTACTTCATCTCAAGACAATATCAAATTTAGGCAAAACACTTCACAACCAGATGTCAAATCCTAG 1569 0.3805 MEVIEEKGQLEEDYTQDGTVDLQGRPVLRSKTGRWKACYFLVGYELFERMAYYGISTNLVVYLTNKFHQGTVEASNNISNWGGSVWIMPLAGAYVADTYLGRYWTFVFASCIYLVGMCLLTLSVSLPSLRPPNCDVGVKFQNCPKASPLQKGIFFFALYIIVLGTGGTKPNISTMGADQFDDFDPREKSHKLSFFNWWYFTILIGVLFSTTLFVYIQDNIGWTLGYGLPTIGLAFSIFVFLLGTPLYRHKLPPGSPITRMLQVFVAAMRKWKLRVPEDTKELHELSMEEYACNGRIRIAHTSFLSFLDKAAIKTGQNSSWMLCTVTQIEETKQMSKLIPVLIFSIIPCTFGMHIGTLFIKQGMTLDKRMGPHFNVSPASLSAFTIIFMMIGISDNFLEIAMMEFFYDQAPENMKSLGTACSTATYGLGGFLSTFILSAVADITQRHGRSGWILDNINVSHLDYYYAFVAALNILNFLGFVVVAKFFVYNDVKLSKSGLEMHATSSQDNIKFRQNTSQPDVKS 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02351 522 Pfam POT family 103 392 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car03g02351 522 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 387 499 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car03g02351 522 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 17 392 IPR000109 GO:0016020|GO:0022857|GO:0055085
Car03g02351 522 SUPERFAMILY MFS general substrate transporter 25 482 IPR036259 -
Car03g02351 522 Gene3D MFS general substrate transporter like domains 390 495 IPR036259 -
Car03g02351 522 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 387 499 - -
Car03g02351 522 PANTHER PROTEIN NRT1/ PTR FAMILY 5.2-LIKE 17 392 - -
Car03g02351 522 Gene3D MFS general substrate transporter like domains 7 389 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02351 Car-Chr3 69431848 69434558 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02351 4 508 Organic Solute Cotransporters AT5G46040 47.611 0.0 531
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02351 - - lja:Lj1g3v4515810.1 597.43
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02351 03 69431848 69434558 Car03g02351 03 69431848 69434558 ECH
Car03g02351 03 69431848 69434558 Car04g02607 04 49744128 49755972 PCT