Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02330 ATGGACAAGTCTAAGCTAGCTCAATTCGGCGAGAGGCTCAAAACCGGTGGGGCCCAGATGGGTCGAATCGTAAGCGGCAAAATGAAGGAAATACTCCAAACTCCGACGCCGGAATCAAAGATGGTCGAGGAAGCAACATCAGAGACGTTGGAAGAACCAAATTGGGGAATGAATCTGAGAATATGCGGTCTAATAAACGCGGAAGAGTTTAACGGTTCGGAAGTTGTGAAGGGTATAAAGAGGAGGATTAATCACAAGAACCCTGTTGTTCAGAAGCATAGCCTTGAGTTGTTGGAAACTTGTGCTATGAATTGTGAAAAGGTTTTTTCTGAAATTGCTTCTGAGAAGCTTTTAGATGATATGGTTAGGTTGTTTGATAATCAACAGGCTGATCAGCAAAATAGAACAAGGGCTTTTCAGCTTATTAGGGCATGGGGTCAGTCTGAAGATCTTGCTTATCTTCCTGTTTTCGCTCAAACTTATACGAGTTTGAAAGGAAGGGGTGAATCACTTGACATGACGGGAGGAAACTCACCACCTATTCCATATGCCTCAGAGTCACATAATTATCAACACCCTTTAGACCCCCCTGAAAGATACCCAATTCCAGAAGCAGGGCTACATGCTCTTGCTCTGGATGACTCAGCAGCTTTCTTTACTGATCACCAACCTGTATCAGTGGAAGAGAAGAAAGAGCATCTTGTGGTTGCTCGAAACAGTCTTGAATTGCTCTCTAGCATATTAAGTTCTGAGGCAGAGCCAAAACCTTTGAAGGAAGATATAACTTTGAGTCTGCTGGATAAGTGCAAGCAATCACTCTCTGTTATTAAGGAGATTGTGGAAAGCACCACAAATGATGAAGAAACACTTTTTGAGGCTTTATATCTCAATGACGAGCTGCAGCAGTTGGTTTCTAAGTATGAAGAGTTGGAAGCTTCTCAAAGTTCAGGGGCACAACTAACACAAAATGCTGACACTGCCAAGCATGATGCCGAAGCTGTTCAAAACCCCAATGAAAGATGTGAAGGTGATGAATCTGAAGAGTTGGAAGCTGCTCAGAGTCTTGATCGAAAACTGCCGAAAAAGTCAAACACTCTTGAAGTGGATGGCAATGCAACCAAGGGGGATGGTCATGTTGAAACCAAAATAGTGGATAGCACTGAAGAGAAGAACGGGGAATCTAGCTTGAAGAGTAATACTACCGAATAA 1209 0.4301 MDKSKLAQFGERLKTGGAQMGRIVSGKMKEILQTPTPESKMVEEATSETLEEPNWGMNLRICGLINAEEFNGSEVVKGIKRRINHKNPVVQKHSLELLETCAMNCEKVFSEIASEKLLDDMVRLFDNQQADQQNRTRAFQLIRAWGQSEDLAYLPVFAQTYTSLKGRGESLDMTGGNSPPIPYASESHNYQHPLDPPERYPIPEAGLHALALDDSAAFFTDHQPVSVEEKKEHLVVARNSLELLSSILSSEAEPKPLKEDITLSLLDKCKQSLSVIKEIVESTTNDEETLFEALYLNDELQQLVSKYEELEASQSSGAQLTQNADTAKHDAEAVQNPNERCEGDESEELEAAQSLDRKLPKKSNTLEVDGNATKGDGHVETKIVDSTEEKNGESSLKSNTTE 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02330 402 MobiDBLite consensus disorder prediction 350 364 - -
Car03g02330 402 Pfam GAT domain 238 311 IPR004152 GO:0035091|GO:0043130
Car03g02330 402 SUPERFAMILY GAT-like domain 192 311 - -
Car03g02330 402 Pfam VHS domain 39 148 IPR002014 GO:0035091|GO:0043130
Car03g02330 402 Gene3D - 215 315 IPR038425 -
Car03g02330 402 PANTHER TOM1-LIKE PROTEIN 1 1 390 IPR044836 GO:0035091|GO:0043130|GO:0043328
Car03g02330 402 SMART VHS_2 38 168 IPR002014 GO:0035091|GO:0043130
Car03g02330 402 MobiDBLite consensus disorder prediction 314 402 - -
Car03g02330 402 PANTHER TOM1-LIKE PROTEIN 2 1 390 - -
Car03g02330 402 SUPERFAMILY ENTH/VHS domain 34 168 IPR008942 -
Car03g02330 402 ProSiteProfiles GAT domain profile. 225 312 IPR004152 GO:0035091|GO:0043130
Car03g02330 402 CDD VHS 39 165 - -
Car03g02330 402 MobiDBLite consensus disorder prediction 373 392 - -
Car03g02330 402 ProSiteProfiles VHS domain profile. 45 172 IPR002014 GO:0035091|GO:0043130
Car03g02330 402 Coils Coil 293 313 - -
Car03g02330 402 Gene3D - 29 181 IPR008942 -
Car03g02330 402 MobiDBLite consensus disorder prediction 314 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02330 Car-Chr3 69209792 69214020 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02330 - - mtr:MTR_7g097010 639.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02330 03 69209792 69214020 Car03g02330 03 69209792 69214020 ECH