Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Car03g02320 | ATGTTTGAAAATAATAATTGGCATCCATATGCGGAGAATGGATGTGGTAAGTGGAAACGCAAGCAAGAAAGAAGTGAACAAAAGTGGGGCCCATGGGCGGTGGAGTGTGTTGCATTATTCATGCTTCCTCAATTCTGTTATGTACTCTTTCATTCCTTCAATTCCATGTCTTTCAGAGGTCTCAGCCGGCCCAATGCTTCATCAGGCATGGGTGTTGATGAGAACAGCAAAAACATCTTCATGGAATTGAAGACAAAGAAGGTCCATCGTTATGTGATCTTTAAGGTTGATGAAAAGAAAAGGGAGGTTGTGGTTGAGAAGACTGGTGGTCCTGCTGAGAGCTATGACGATTTCGCTGCATCTTTGCCTGAGAATGATTGCAGATATGCTGTGTTTGACTTTGATTTTGTCACTTCTGAGAACTGTCAAAAGAGCAAAATCTTCTTCATTGCATGGTCTCCTTCAACGTCTCGAATCCGTGCCAAGATGCTCTATGCCACAACTAAAGAAAGGTTTAGGCGCGAGCTAGATGGTGTCCATTATGAAATCCAGGCTACTGACCCTACAGAAATGGATCTCGAAGTGCTGAGGGACCGAGCACATTGA | 606 | 0.4373 | MFENNNWHPYAENGCGKWKRKQERSEQKWGPWAVECVALFMLPQFCYVLFHSFNSMSFRGLSRPNASSGMGVDENSKNIFMELKTKKVHRYVIFKVDEKKREVVVEKTGGPAESYDDFAASLPENDCRYAVFDFDFVTSENCQKSKIFFIAWSPSTSRIRAKMLYATTKERFRRELDGVHYEIQATDPTEMDLEVLRDRAH | 201 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Car03g02320 | 201 | ProSiteProfiles | ADF-H domain profile. | 67 | 201 | IPR002108 | GO:0003779 | |
| Car03g02320 | 201 | CDD | ADF_cofilin_like | 68 | 200 | IPR017904 | GO:0015629|GO:0030042 | |
| Car03g02320 | 201 | Pfam | Cofilin/tropomyosin-type actin-binding protein | 78 | 198 | IPR002108 | GO:0003779 | |
| Car03g02320 | 201 | Gene3D | Severin | 60 | 201 | IPR029006 | - | |
| Car03g02320 | 201 | SMART | adf_2 | 74 | 201 | IPR002108 | GO:0003779 | |
| Car03g02320 | 201 | PANTHER | COFILIN/ACTIN-DEPOLYMERIZING FACTOR-LIKE PROTEIN | 56 | 201 | - | - | |
| Car03g02320 | 201 | SUPERFAMILY | Actin depolymerizing proteins | 66 | 201 | - | - | |
| Car03g02320 | 201 | PANTHER | COFILIN-RELATED | 56 | 201 | IPR017904 | GO:0015629|GO:0030042 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Car03g02320 | Car-Chr3 | 69158993 | 69162846 | Dispersed/Wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Car03g02320 | K05765 | - | gmx:100819975 | 271.552 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Car03g02320 | 03 | 69158993 | 69162846 | Car03g02320 | 03 | 69158993 | 69162846 | ECH |