Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02305 ATGTCGAACCCTCAAAGCCAGAAGCCATGGAAAGCAGAGTACGCGAAATCAGGACGATCGTCATGCAGAAGCTGCAAGACTCCCATTGCCACCGAGAAACTCCGTCTCGGCAAGATGGTTCAATCCTCCAAATTCGACGGCCTCATGCCCATGTGGAATCATGCGGAATGCATATTGAAGAAACCCAAACAGATAAAATCAGTTGATGATTCGAACACCCCTGCAAAGTCGAATGCTGGCAAAAATGTTGAATATGGTATTGAGGTTTCACAAACTTCACGTGCCACTTGCAAGCCTTGTGGTCAAAAAATTATCAAAGGAGAGGTTCGCATATCTACTAAGCCTGATGGTCAAGGTCCTAGGGGTTTGGCTTGGCACCATGCCAAGTGTCTCTTGGAACTATCTCCATCAATTGAAGTCGATAGTTTGTCTGGATGGAATAGTCTCTCATCTTCTGATCAATCAGCTCTCAGTGATTTGGTTATGAAGGGCCGTCCTACTAATAAGGGAGGTGGTAGTGGTACAAAAGTAGAGGTTGAAGAGGTTAAAGAATCAACAAAACAATCCTCTTCCAAAGGTGGCACAAAACGGGGGAAAGAGGCTGAGGGTGAGCAGAAGTCAAAAGCTGCTAAGGTCAAGGGAGATGTGTCTGTGGGCAGGGTAGCGGCCATGAAAAATGCTGATGACTCGGGGGAGGCATCTGATCTTGAGAAAAGACTGGAGGCCCAGAGCAAAGAACTCTGGGATCTAAAGGATGATCTTAAAAAGCACGTGACAACAGCAGAGTTGCGTGAAATGCTGGAAACCAACGGTCAAGATTCAACTGGATCAGAGCTTGATTTGCGCGATCGCTGTGCTGATGGAATGATGTTTGGAGGACTTTCTCATTGCTCATTATGTTCTGGTTTTTTGCGTTATTCTGGAGGAATGTACCGGTGCACTGGATTCATTTCTGAGTGGAGTAAATGTTCAAACTCTACCTGTGAACCAAAACGTACTGAAGGGAAGTGGAGAATCCCAAAGGAAACAGATAATCAGTACCTTAAAAAGTGGTTCAAATCTCAAAAAGGGAAGAAACCAATTAGGATAATGCCTCCGCCGTCGTCAAGGACTTCTGCTGAAAGTCAAATTTCTGCAGGCCAGCATCAATCATCGCACAGTGAAAGTTTGGCAGATTTGAAAGTTGCCATCTCTGGATTACCTAAAGATTCCTTTGAAGACTGGAAACGCAAGATTGATGGTGTGGGTGGAGTGCTTCATGCAAAAGTGAAGAAAGATACTAACTGCTTGGTGGTCAGTGGAGCACTTAAGGATGAAGCTGAGATGCGGAAAGCAAGGAGGATGAAAATACCAATAGTCAGAGAGGACTATTTGGTTGACTGTATGGAAAGAAAGAAAAAACTTCCATTTGATATGTACAAAGTTGAAATGATTGGTGAGGCTTCTAGTATGGTCACCATCAAAGTGAAGGGGCACAGTGCCGTTCATGATGCTTCTGGCCTACAGGATTCTGGCCACATACTAGAGGAAGGGAAAAGCATATATAATACAACTTTGAATATGTCTGATTTGTCTACTGGTGTTAACAGCTACTACATCCTTCAAATAATTGAAGAAGATAAAGGGTCAGATTGTTATGTGTTTCGAAAATGGGGTCGAGTGGGAAATGAGAAGATTGGAGGATTCAAACTGGAGGAAATGTCAAAATCTGACGCAATAAGAGAATTCAAACGACTATTCTTTGAGAAAACTGGAAACCCTTGGGAGGCATGGGAACAAAAGACTATTCAGAAGCAACCTGGAAGATTCTTCCCCTTGGAAATTGATTATGGAGTTAACAAACAAGTCTCAAAAAAGAATAAAAATAATGCAGATAGCAAACTACCCCCTCCATTAATAGAATTGATGAAGATTCTCTTTAATGTGGAAACATACAGAGCTGCCATGATGGAATTTGAGATCAATATGTCCGAAATGCCACTTGGGAAACTGAGCAAAAGTAATATACAAAAGGGGTTTGAAGCATTAACAGATATTCAAAATCTTTTTAAAATTAGCAATCCTGATCCATCAGCCAGGGAAAGCTTGCTTATTGATGCCAGTAATCGGTTCTTCACTATGATCCCTTCCATTCATCCACATATTATTAGGGACGAGGATGATTTTAAGTCAAAGGTGAAAATGTTAGAAGCCCTTCAAGACATTGAAATAGCCTCAAGATTAGTTGGATTTGATGCCAACAATGACGACTCCATTGATGATAATTATAAGAAGCTCCATTGTGGTATATCTCCACTTCCTCATGACAGTGAAGATTTTCGATTAGTTGAGAAGTATCTACATACTACTCATGCCCCAACACATGTGGACTGGAGTCTTGAGCTAGAAGAAGTTTTTTCACTTGAAAGAGAAGGAGAATTTGATAAGTTTGCACCTTATAGGGACAAACTTGGTAACAGAATGCTCTTATGGCATGGTTCTAGGTTGACAAACTTTGTGGGCATTCTTAACCAAGGACTCAGAATTGCACCTCCTGAAGCTCCTGCAACTGGCTATATGTTTGGCAAAGGGATTTACTTTGCTGACCTGGTCAGCAAGAGTGCTCAGTATTGCTACACTGATAAGAAAAATCCTGTTGGTCTAATGCTTTTGAGTGAAGTTGCTCTTGGAAATGTCTATGAGCTCAAAAAAGCTAAGTATATGGATAAACCTCCAGAAGGAAAGCATTCTACAAAAGGATTGGGCAAAAAAATGCCCCTTGAATCGGAATATGTAAAGTGGAGAGGTGATGTCGTTGTTCCTTGTGGGAAACCAGTGTCATCAAATGTCAAGGCATCTGAGCTCATGTACAATGAGTTTATTGTCTATAATACTGCTCAAGTTAAACTGCAATTCTTGTTAAAGGTGAGGTTCCATCACAAGAAATGA 2928 0.4156 MSNPQSQKPWKAEYAKSGRSSCRSCKTPIATEKLRLGKMVQSSKFDGLMPMWNHAECILKKPKQIKSVDDSNTPAKSNAGKNVEYGIEVSQTSRATCKPCGQKIIKGEVRISTKPDGQGPRGLAWHHAKCLLELSPSIEVDSLSGWNSLSSSDQSALSDLVMKGRPTNKGGGSGTKVEVEEVKESTKQSSSKGGTKRGKEAEGEQKSKAAKVKGDVSVGRVAAMKNADDSGEASDLEKRLEAQSKELWDLKDDLKKHVTTAELREMLETNGQDSTGSELDLRDRCADGMMFGGLSHCSLCSGFLRYSGGMYRCTGFISEWSKCSNSTCEPKRTEGKWRIPKETDNQYLKKWFKSQKGKKPIRIMPPPSSRTSAESQISAGQHQSSHSESLADLKVAISGLPKDSFEDWKRKIDGVGGVLHAKVKKDTNCLVVSGALKDEAEMRKARRMKIPIVREDYLVDCMERKKKLPFDMYKVEMIGEASSMVTIKVKGHSAVHDASGLQDSGHILEEGKSIYNTTLNMSDLSTGVNSYYILQIIEEDKGSDCYVFRKWGRVGNEKIGGFKLEEMSKSDAIREFKRLFFEKTGNPWEAWEQKTIQKQPGRFFPLEIDYGVNKQVSKKNKNNADSKLPPPLIELMKILFNVETYRAAMMEFEINMSEMPLGKLSKSNIQKGFEALTDIQNLFKISNPDPSARESLLIDASNRFFTMIPSIHPHIIRDEDDFKSKVKMLEALQDIEIASRLVGFDANNDDSIDDNYKKLHCGISPLPHDSEDFRLVEKYLHTTHAPTHVDWSLELEEVFSLEREGEFDKFAPYRDKLGNRMLLWHGSRLTNFVGILNQGLRIAPPEAPATGYMFGKGIYFADLVSKSAQYCYTDKKNPVGLMLLSEVALGNVYELKKAKYMDKPPEGKHSTKGLGKKMPLESEYVKWRGDVVVPCGKPVSSNVKASELMYNEFIVYNTAQVKLQFLLKVRFHHKK 975
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02305 975 Pfam Poly(ADP-ribose) polymerase catalytic domain 770 971 IPR012317 GO:0003950
Car03g02305 975 Pfam PADR1 (NUC008) domain 283 333 IPR012982 -
Car03g02305 975 SUPERFAMILY Domain of poly(ADP-ribose) polymerase 626 760 IPR036616 GO:0003950
Car03g02305 975 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 7 65 - -
Car03g02305 975 MobiDBLite consensus disorder prediction 1 23 - -
Car03g02305 975 MobiDBLite consensus disorder prediction 193 213 - -
Car03g02305 975 PIRSF NAD_ADPRT 3 75 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Car03g02305 975 PIRSF NAD_ADPRT 70 975 IPR008288 GO:0003677|GO:0003950|GO:0005634|GO:0008270|GO:0051287
Car03g02305 975 ProSiteProfiles PARP alpha-helical domain profile. 625 743 IPR004102 GO:0003950
Car03g02305 975 PANTHER POLY [ADP-RIBOSE] POLYMERASE 1 70 969 - -
Car03g02305 975 Gene3D - 219 292 - -
Car03g02305 975 Pfam WGR domain 515 593 IPR008893 -
Car03g02305 975 ProSiteProfiles WGR domain profile. 504 603 IPR008893 -
Car03g02305 975 Coils Coil 233 253 - -
Car03g02305 975 ProSiteProfiles BRCT domain profile. 385 475 IPR001357 -
Car03g02305 975 CDD parp_like 626 970 - -
Car03g02305 975 ProSiteProfiles SAP motif profile. 255 289 IPR003034 -
Car03g02305 975 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 83 170 - -
Car03g02305 975 SMART zf_PARP_3 13 84 IPR001510 GO:0003677|GO:0008270
Car03g02305 975 SMART zf_PARP_3 88 162 IPR001510 GO:0003677|GO:0008270
Car03g02305 975 Gene3D - 615 759 IPR036616 GO:0003950
Car03g02305 975 SUPERFAMILY WGR domain-like 483 608 IPR036930 -
Car03g02305 975 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 88 160 IPR001510 GO:0003677|GO:0008270
Car03g02305 975 Pfam Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region 13 65 IPR001510 GO:0003677|GO:0008270
Car03g02305 975 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 85 165 IPR001510 GO:0003677|GO:0008270
Car03g02305 975 CDD WGR_PARP1_like 505 610 - -
Car03g02305 975 SMART BRCT_7 387 465 IPR001357 -
Car03g02305 975 SMART PADR1_2 281 334 IPR012982 -
Car03g02305 975 Gene3D - 293 353 IPR038650 -
Car03g02305 975 PANTHER DNA LIGASE 70 969 - -
Car03g02305 975 Gene3D - 1 73 IPR036957 GO:0003677|GO:0008270
Car03g02305 975 Gene3D - 75 185 IPR036957 GO:0003677|GO:0008270
Car03g02305 975 ProSiteProfiles Poly(ADP-ribose) polymerase zinc finger domain profile. 10 64 IPR001510 GO:0003677|GO:0008270
Car03g02305 975 SMART WGR_cls 515 598 IPR008893 -
Car03g02305 975 MobiDBLite consensus disorder prediction 368 388 - -
Car03g02305 975 Gene3D - 760 975 - -
Car03g02305 975 MobiDBLite consensus disorder prediction 358 388 - -
Car03g02305 975 Pfam Poly(ADP-ribose) polymerase, regulatory domain 626 756 IPR004102 GO:0003950
Car03g02305 975 MobiDBLite consensus disorder prediction 162 213 - -
Car03g02305 975 ProSiteProfiles PARP catalytic domain profile. 750 975 IPR012317 GO:0003950
Car03g02305 975 SUPERFAMILY ADP-ribosylation 759 974 - -
Car03g02305 975 Pfam BRCA1 C Terminus (BRCT) domain 390 462 IPR001357 -
Car03g02305 975 Gene3D BRCT domain 380 482 IPR036420 -
Car03g02305 975 SUPERFAMILY BRCT domain 387 475 IPR036420 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02305 Car-Chr3 69041219 69050494 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02305 K24070 - gmx:100800968 1611.28