Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02276 ATGGATTGGCTTTCAAATATTTGTACTATTGCGATCATTTTCTTTGGTACCATAATTTGTCACGCATTTGCTCTCTCGATCAGTCTACACGATGTGGAATGCGTATCAGAGCATGTTCCATATGAAGGTGATATTATTTCTGGAAACTTTGTCGTCATGGACCACGATATATTTTGGAGCTCGGATCACCCTGGAATTGATTTTACGGTGACATCTCCGGGAGGAAATGTGATTCAGTCTTTGAAGGGAACATCAGGGGACAAGTTTGAGTTCAAAGCCACACAAAGTGGAATTCATAAGTTCTGCTTTCATAATCCTTTCTCTACGCCAGAAACTGTATCCTTCTATGTCCATGTTGGCCACATTCCAAATGAACATGATTTAGCTAAAGATGAGCATTTGGATCCAATTAATGTGAAGATTGCTGAGTTGAGAGAAGCATTGGAATCTATTATAACAGAACAAAAGTACTTGAAAGCACGTGATGCTAGACATCGACATACAAATGAGAGCACTAGAAAACGTGTTGTCGTTTACACACTCTTGGAGTATATTTTATTCGTCACTACAAGTATATTGCAAGTGGTATACATTCGTCGACTCTTCAGCAAATCATTTGCTTACAATAGGGTGTAG 636 0.3884 MDWLSNICTIAIIFFGTIICHAFALSISLHDVECVSEHVPYEGDIISGNFVVMDHDIFWSSDHPGIDFTVTSPGGNVIQSLKGTSGDKFEFKATQSGIHKFCFHNPFSTPETVSFYVHVGHIPNEHDLAKDEHLDPINVKIAELREALESIITEQKYLKARDARHRHTNESTRKRVVVYTLLEYILFVTTSILQVVYIRRLFSKSFAYNRV 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02276 211 SMART EMP24_GP25L_2 22 203 IPR009038 -
Car03g02276 211 ProSiteProfiles GOLD domain profile. 32 119 IPR009038 -
Car03g02276 211 Pfam emp24/gp25L/p24 family/GOLD 26 202 IPR009038 -
Car03g02276 211 PANTHER EMP24/GP25L/P24 FAMILY/GOLD PROTEIN 4 207 - -
Car03g02276 211 SUPERFAMILY Supernatant protein factor (SPF), C-terminal domain 42 128 IPR036598 -
Car03g02276 211 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 4 207 IPR015720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02276 Car-Chr3 68756692 68758176 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02276 K20347 - gmx:100789501 363.614