Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02254 ATGGATACGGTTGAGGAAGTTGAGATTCCAATTCCAATTCTATCATCGTCTTCATCATCAATGGCGAAGAGACCCTGTCCATCTCAAAACCCTAGAATGGAAGTCGAGCATCTCCTCGATGAATTCCTCTCCTTATCTGACCTTCCTTCTCTCTCCCTCGATCTCTACTTCGAGAATCTTCTTCAATCTATGCCTACCGACTCCGATCTCATCGATCGCGCTCTCAAAATGGGTTCTCTCCTTCTCGATGCGGCCAAACACTCTTCCCGCAAACGCGCTTCTAACCACAATTCTCTCACCTGGCCTCTCCCTCCTGATCTCACTTTCAAGGTCTTCTCGATGCTCGATACTCAGAGCCTGTGCTATGCATCAGCTACTTGTTCGTTTTTTAGCAAATGTGCTAAAGATCCTCTGTGCTATGAGAATCTTGATTTGACAACACTTGTTCCCAAGGTTAACAATGCAGTAGTTGCCACGATGATTCAGCGAGCTGGAAAGGCACTAAGGTCTCTTAAACTTGGTGTTGTCCCTGCTACTGCTTGTTCACCTGGATTTTGTCAACCATTGGTTTGTACTGTCAGAAAAGCTATTGTAGAGGGGTCTAACTTGTCATGGAATGATAAGAGGTCTCGTCAAGGGAGAGAGTCATCCATTCTTACAAGATGCTGTTTAAGCCCTTTAAGTGGGGATGGTGGTGCATCAGGGGCGCTTTTGAGAAAGTTGCACCTGTACAATATTGAGAGAATGGACAATCCATCCCTTGGTTGTGCATTGTCAGCGTGCCCTTCTCTCCTTGATCTGGAAATTGTTGGAATCCATGTTGAACTGAGGCAAACACTAATGTCAGTAAGTGCAAGCTGCCATTTGATTGAGCGTTTGTTTTTTGAGTCTTCTAGAACAGGTAGAGATGACAGCTTGAAAGCTCAAACCTGTTCCGAGCTAGTAAACAATTGCCCTCATCTAACTTCTTTATCTCTTCGAGGGTTTAAGCTACACGATTGTAAAGTTCGAATACTGGTTAAGGGATTTCGGAAACTGAAATTCGTTGACTTTTCAACATCCTATTCAATCACAGGAAATTTCTTAAGGAACCTTGGAGGCTGCAATGGTGGGAATTTGCTCGAGGTTTTAATTTTAAGGGATTGCATGCATCTCAAAGAGGTGGAAGTTGCTAGGTTGTTGACAGCAATTGTTGCAGGAGATTTCAAATTGCTTATACATCTGGACATATCCAATAGGGAAGGCTTAGCATGTGAAGCTGACTGGTATCATAGGTGCTACAACTCTAGTATTATGCCTATAAAGCAAGTTTTGGAAGCAAGGCCTGATATGCGTTTGGTGGCTGAATATCCATCAGAAGGAAGCTACGTCGAGACATTTGATTCTGACATGAATAGTGATATAAGCCTGATATCACAATTTAGCAGCCACACGTCAGATGGATCAATTTTTATGAGTACATCTGAAAGCAGCTACAATAGTGATCATGGTAGTGGCAATGAGGAAGGACAAGATGCTGTTATTTATGGGGAAAGCTCAGATGAGGACTACAATCTGAACCTGTAA 1566 0.4317 MDTVEEVEIPIPILSSSSSSMAKRPCPSQNPRMEVEHLLDEFLSLSDLPSLSLDLYFENLLQSMPTDSDLIDRALKMGSLLLDAAKHSSRKRASNHNSLTWPLPPDLTFKVFSMLDTQSLCYASATCSFFSKCAKDPLCYENLDLTTLVPKVNNAVVATMIQRAGKALRSLKLGVVPATACSPGFCQPLVCTVRKAIVEGSNLSWNDKRSRQGRESSILTRCCLSPLSGDGGASGALLRKLHLYNIERMDNPSLGCALSACPSLLDLEIVGIHVELRQTLMSVSASCHLIERLFFESSRTGRDDSLKAQTCSELVNNCPHLTSLSLRGFKLHDCKVRILVKGFRKLKFVDFSTSYSITGNFLRNLGGCNGGNLLEVLILRDCMHLKEVEVARLLTAIVAGDFKLLIHLDISNREGLACEADWYHRCYNSSIMPIKQVLEARPDMRLVAEYPSEGSYVETFDSDMNSDISLISQFSSHTSDGSIFMSTSESSYNSDHGSGNEEGQDAVIYGESSDEDYNLNL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02254 521 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 34 466 - -
Car03g02254 521 PANTHER F-BOX SKIP17-LIKE PROTEIN 34 466 - -
Car03g02254 521 SUPERFAMILY F-box domain 89 146 IPR036047 GO:0005515
Car03g02254 521 MobiDBLite consensus disorder prediction 486 500 - -
Car03g02254 521 MobiDBLite consensus disorder prediction 486 521 - -
Car03g02254 521 Pfam F-box-like 103 145 IPR001810 GO:0005515
Car03g02254 521 Gene3D Ribonuclease Inhibitor 95 399 IPR032675 -
Car03g02254 521 SUPERFAMILY RNI-like 223 415 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02254 Car-Chr3 68552997 68557272 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02254 K10268 - gmx:100786317 823.157
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02254 03 68552997 68557272 Car03g02254 03 68552997 68557272 ECH