Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02242 ATGGAAGCAACGCGATTCTCCTTCTATCACTTCCATCATCCTCACAACTTCACACCCAAACCCAAAGCACTTCCAGGAAGAAGACACGCAAAAACCGTCAACGGAATTAGAACTAGGGTTTCATTTTTTACACTCCCTACATTAACCACAACAAATTCACATTCACTAAACCGAATAGTTTCCGTTAACTTCTCCGACCGACTTCGAAGTGATTATACGCACGTCGAGACACCACTTTTAAGCGAAGAAGTTGTTCCGGAAACTCGCGGTGACGACGGTGAAGCAATCGTTGCTTCTCCGAGCGGCGACAACTCGTTAGCCTTAGAGTTTAAACCTAGAACGTTTCAAAATAGGTTTATGAACTTTATGCGTTTTGGTTCTGTTATTAATGGCGCTGCTGAATCGTTTTTCAAGAGCGAGATTCGGAGGAGATTGTTTGTTACGGCTGTGTTAATTGTGATTAGTCGAGTTGGTTATTTTATTCCTCTTCCTGGATTTGATAGAAGGTTGATACCAAAAGATTATATGAGCTTTGTTTCTGGATCATCTGTTGATGAACTTGGTGACTTCTCCTCTGACCTCAAGCTATCTCTTTTCCAACTTGGAATCAGTCCTCAGATAATAGCGTCCATAATTATGCAGGTATTCTGTCATGTTGTTCCTTCTCTAGTTAAGTTGCGGAAAGAAGGTTTGGATGGGCATGAGAAGATTAAGAGTTATATTTGGTGGATGTCACTGGGATTTGCAATTATGGAAGCTCTAATAGTTTCTTTCTACTCACTTCCATACTCAATTTATGCTGCTAGTTATAGGTTCAAACATGTAATGGTGACAACGTTGTTGTTGGTTTGTGGGGCAATGACTATAACATGGATATGTGATACCATATCAGAATCTGGATTTGGTCAAGGTTCATCTCTTATCATATGTGTTGGAATACTGACGGGTTATATGGAGACATTACACAAAATGCTCACTCAGCTTTCAGTGAGTTCTGTTAGTTGGTGGCCATATGTGCTTGCAGTACTGGGTCTCTTCACCATAGTCACTATGTGGGCAGTTGTAGTAACTGAAGGCTGCAGGAAAGTAAAGCTTCAGTACTATGGTTTTAAACTTGCTTCTTCTGCAAGGGAGCAATCGCCTATTACTGAAGTGGAGCCCTATATTCCTTTCAATATTAATCCAGCAGGGATGCAACCTGTTCTTACCACCTCTTACCTCTTGGCCTTTCCAAGCATTGTTGCTAGTCTGCTCGGATCACCTTTTTGGGCGCATGTGAAGGAAATATTGAATCCTGAAACTTCTGTTGGTGCCAAACCGTGGGTCTACTATTCCATTTATGCCTTCTTTGTCTTCCTGTTCAATATATTTGATATTGCTAACTTGCCAAAGGAAATTGCTGATTACTTGAATAAGATGGGTGCAAGAATACCAAATGTTAAACCTGGGAAGGCCACAATAGAATACCTCTCAAAGGGGGGCTATTGTTAA 1491 0.4105 MEATRFSFYHFHHPHNFTPKPKALPGRRHAKTVNGIRTRVSFFTLPTLTTTNSHSLNRIVSVNFSDRLRSDYTHVETPLLSEEVVPETRGDDGEAIVASPSGDNSLALEFKPRTFQNRFMNFMRFGSVINGAAESFFKSEIRRRLFVTAVLIVISRVGYFIPLPGFDRRLIPKDYMSFVSGSSVDELGDFSSDLKLSLFQLGISPQIIASIIMQVFCHVVPSLVKLRKEGLDGHEKIKSYIWWMSLGFAIMEALIVSFYSLPYSIYAASYRFKHVMVTTLLLVCGAMTITWICDTISESGFGQGSSLIICVGILTGYMETLHKMLTQLSVSSVSWWPYVLAVLGLFTIVTMWAVVVTEGCRKVKLQYYGFKLASSAREQSPITEVEPYIPFNINPAGMQPVLTTSYLLAFPSIVASLLGSPFWAHVKEILNPETSVGAKPWVYYSIYAFFVFLFNIFDIANLPKEIADYLNKMGARIPNVKPGKATIEYLSKGGYC 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02242 496 PRINTS Preprotein translocase SecY subunit signature 145 163 - -
Car03g02242 496 PRINTS Preprotein translocase SecY subunit signature 196 216 - -
Car03g02242 496 PRINTS Preprotein translocase SecY subunit signature 237 260 - -
Car03g02242 496 PRINTS Preprotein translocase SecY subunit signature 441 463 - -
Car03g02242 496 PRINTS Preprotein translocase SecY subunit signature 396 415 - -
Car03g02242 496 PRINTS Preprotein translocase SecY subunit signature 298 321 - -
Car03g02242 496 PRINTS Preprotein translocase SecY subunit signature 272 297 - -
Car03g02242 496 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 119 492 IPR002208 GO:0015031|GO:0016020
Car03g02242 496 PANTHER PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC 119 492 - -
Car03g02242 496 Gene3D SecY subunit domain 129 493 IPR023201 -
Car03g02242 496 Pfam SecY 197 492 IPR002208 GO:0015031|GO:0016020
Car03g02242 496 SUPERFAMILY Preprotein translocase SecY subunit 125 492 IPR023201 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02242 1 492 Miscellaneous Gene Families AT2G31530 64.786 0.0 662
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02242 - - gmx:100803256 805.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02242 03 68399741 68405806 Car03g02242 03 68399741 68405806 ECH