Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02240 ATGGAATCAAGTCATATAATATCCATTACAAATGGAGAAGAAAACAACAACAATATTGCTCATATGAAGAAAGAAAAAACAACCCAATTTCCACTTCCACCTATTGTTTCCCATCATGGAAAAAATAAAATACACTCCTCTTTTGTTCCCATTACTTCCTATCTCAAAGACAATAAGGAAATAAAAAATGAGTGTGACATTAAGAAGATGATCCATTGCATCAAAGTTGGAATCTCACTTGTCTTGGTTTCACTTCTTTATATTTTGAATCCTTTGTTTGATCAAGTTGGTGAAAATGCAATGTGGGCTATCATGACCGTTGTTGTCATCTTTGAATCCTCCGCAGGAGCTACACTAGGAAAAGGCATAAATCGTGGGATAGGGACTATTGTAGGAGGAGGAATTGGATGCTTGGCAGCAATATTAGCCCAAAACATTGGGGGAGTTGGAAACTCAATTTTCATTGCTACTTCGGTGTATATAATTGGATCAATGGcaacatattttcgactagttccaaaaataaagaatagatatgattatggagtagtggtgtttatgcttacattcaatctagtagtggtatctgggtcacgtccaggtgtcaaagtttgggaagtagcaagagaacgtttattgacaattctaatgggtttcattgtttgcatttgtgtgagtttgtttgtctttcctatgtgggccagtgatgaacttcattattccattctctcaacattcCAGGATCTTGCCAATACAATTCAAGGTTGCTTAGAGGAATGTTCCAAATCCGTCAAGGAAAAGGAAAATCAAGCTGATGCAAGCTTCACAATTTGCAAGTCAGTGTTGAACTCCAAATCAAAGGATGAATCATTGGCAAATTTTGCAAAATGGGAGCCTTGGCATGGAAAATTTGGATTTTCCTACCCATGGGAAAAGTACTTAAAGATTGGTGAAGTTCTTCGAGAGCTAGCTGCACTCATTCTTGCATTGGAAAGTTGCATTCGTGCCTCAAAAAAGCCCACGTCATGTTGGAAGAGTTCAAAAACAGTCCAATTTGAACAGTGTGAAGCAATTGGGTCGAGGCTTGTTTGGACTCTAAGAGAAATTGGAGATAATATGAAACAAATGAAAAAATGTGAAGAAGTGGACAGCATTATGGCTAAGTTGAAATCAACAAGAGAAGAGTTGAGTTTGGTAATTTCCACATCCATGATAGCTGAATTTGAGAATGGAGAAGTGCTAGCAATTGCAAGCTTGGTGTTCTTGCTTATGGAAGTGGTGGAGAAAGTTGAAGAATTGGTTAAAGAGGTTAAGGAACTCGGAGATATGGCTCGTTTTCGTACCCGAGTAACTTCAGAGTCTTCGTAG 1368 0.3158 MESSHIISITNGEENNNNIAHMKKEKTTQFPLPPIVSHHGKNKIHSSFVPITSYLKDNKEIKNECDIKKMIHCIKVGISLVLVSLLYILNPLFDQVGENAMWAIMTVVVIFESSAGATLGKGINRGIGTIVGGGIGCLAAILAQNIGGVGNSIFIATSVYIIGSMATYFRLVPKIKNRYDYGVVVFMLTFNLVVVSGSRPGVKVWEVARERLLTILMGFIVCICVSLFVFPMWASDELHYSILSTFQDLANTIQGCLEECSKSVKEKENQADASFTICKSVLNSKSKDESLANFAKWEPWHGKFGFSYPWEKYLKIGEVLRELAALILALESCIRASKKPTSCWKSSKTVQFEQCEAIGSRLVWTLREIGDNMKQMKKCEEVDSIMAKLKSTREELSLVISTSMIAEFENGEVLAIASLVFLLMEVVEKVEELVKEVKELGDMARFRTRVTSESS 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02240 455 Coils Coil 423 443 - -
Car03g02240 455 Pfam Aluminium activated malate transporter 66 441 IPR020966 GO:0015743
Car03g02240 455 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 12-LIKE 4 447 - -
Car03g02240 455 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 4 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02240 Car-Chr3 68381756 68385596 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02240 66 444 Miscellaneous Gene Families AT1G08440 37.922 1.48e-86 272
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02240 - - gmx:100802201 546.584
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02240 03 68381756 68385596 Car03g02240 03 68381756 68385596 ECH