Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02238 ATGTTTTTCATCATGACCCACATGGATTTTCTCAAGAAATTCAAACGCTTTAACCCTCTAGAACCTTCTTTAACTATTGTTGGATTCTTTTTCGCTGCTATTCTCTTCATTACTTGCTTTTTTTATATTGATTACAACGCTTTACTTCGCTCTCATGGAAAATCTCTTTTTTCCTTTCATTTTTCTTCTCTATCTTCTTCTATTCAGTTTTTGAGTCAACAAGGTGATAACTGTGATGTCTTTGATGGAAATTGGGTTTGGGATGACACATACCCACTTTATCATTCCTCAAATTGTTCATTCTTGGATCAAGGTTTTCGTTGCTCTGAGAATGGTAGACCTGATAGTTTCTACACTAAGTGGAGATGGCAACCTAAAGATTGCAACTTGCCAAGATTTGATGCAAGGAAGATGCTGGAAAATTTACGAAACAAGCGGTTAGTTTTTGTTGGCGATTCGATTGGAAGGAACCAATGGGAATCGCTGCTTTGTATGTTATCTTCTGTCGTTACGAACAAGAGTTCTGTCTATGAGGTTAACGGAAATCCAATTACAAAGCACACAGGCTTCTTGGCGTTTAAGTTTGACGATTTCAACTGTACCGTTGAATACTACAGGTCTCCATTTTTAGTAGTGCAGGGACGGCCTCCTCCCGGGGCGCCTGGACAGGTGAGATTGACTTTGAGAGTGGATCGTATGGACTGGAATTCTCATCGGTGGAGAGGTGCAGATGTGTTGGTGCTCAATGCTGGACATTGGTGGAATTACGAAAAAACTATCAAAACGGGTTGTTACTTCCAAATAGGGGAGGAAGTGAAGATGAATATGTCTACAGAAGATGCATTCAGAAGATCAGTCGAGACAGTAGTTGATTGGATCACCCGTGAATTAAACAGGAACAAAACATACGTCCTTTTCCGAACCTACGCTCCTGTGCATTTCAGGGGTGGTGACTGGAATACCGGTGGTGGTTGTCACATGGAAACGCTGCCCGATTTAGGCTCCTTGCCTGTACTCTCCGACGTTCATTTCAGTACTGTAACTGATGTTTTGTCAGAACACGTGCGTAAATCAAATGTTCTGAATGTGGACTTACTTAATGTCACCCAAATGTCAGTACGCAGGAAAGACGGCCATATGTCTATTTACTATCTCGGGCAAGACCATACAGCCGCTATGCAGCGGCAAGACTGTAGCCATTGGTGCCTCCCAGGCGTTCCTGATTCATGGAACGAGATTCTTTATGCTCTTCTTCTCAAGAAGGAGGGTTTTTCGAAGCAAAATACAACAAATGTTTCTCAAATTTTGATATAA 1314 0.417 MFFIMTHMDFLKKFKRFNPLEPSLTIVGFFFAAILFITCFFYIDYNALLRSHGKSLFSFHFSSLSSSIQFLSQQGDNCDVFDGNWVWDDTYPLYHSSNCSFLDQGFRCSENGRPDSFYTKWRWQPKDCNLPRFDARKMLENLRNKRLVFVGDSIGRNQWESLLCMLSSVVTNKSSVYEVNGNPITKHTGFLAFKFDDFNCTVEYYRSPFLVVQGRPPPGAPGQVRLTLRVDRMDWNSHRWRGADVLVLNAGHWWNYEKTIKTGCYFQIGEEVKMNMSTEDAFRRSVETVVDWITRELNRNKTYVLFRTYAPVHFRGGDWNTGGGCHMETLPDLGSLPVLSDVHFSTVTDVLSEHVRKSNVLNVDLLNVTQMSVRRKDGHMSIYYLGQDHTAAMQRQDCSHWCLPGVPDSWNEILYALLLKKEGFSKQNTTNVSQILI 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02238 437 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 130 416 IPR026057 GO:0016740
Car03g02238 437 Pfam PMR5 N terminal Domain 77 129 IPR025846 -
Car03g02238 437 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 13 425 - -
Car03g02238 437 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 13 425 IPR029962 GO:0016413
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02238 Car-Chr3 68372367 68375707 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02238 - - gmx:100779356 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02238 03 68372367 68375707 Car03g02238 03 68372367 68375707 ECH