Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02232 ATGTTTAGCAATAGTGGCGGAAGTGGAACGGCGTTTCCACCTGGTTCCTTCGTTTACGACGCCGATGATGTTCCTTTTGGTACTGTGTGGTGGTTTCTTTATGCTGGAATTTCATGTTTACTCGTTCTCTTTGCTGGTATCATGTCTGGTCTCACTCTTGGTTTAATGTCTTTGGGTCTTGTTGACCTTGAAATTCTCCTTAGAACTGGTTCTTCCACTCAGAAAAAACAAGCTGCTGCTATTTTTCCTATTCTTCAAAAACAACACCAGCTGCTTGTTACTTTGCTTCTTTGTAATGCTTGTGCTATGGAGGCACTTCCACTTTACCTTGATAAAATTTTTCATCCTGTAGTAGCAGTGTTGTTATCAGTAACTTTTGTTTTGGCTTTTGGAGAGGTCATCCCACAAGCTATATGCACAAAATATGGGCTCTATGTCGGTGCAAATTTTGTCGGGCTCGTACGTGTTCTGATGATCATCTGTTATCCAATTGCTTACCCTATCGGAAAGGTTTTGGATATTTTGCTTGGACACCACGATGTAATGTTTAGACGAGCACAATTGAAAGCCCTTGTTTCAATCCATAGCGAAGAGGCTGGTAAAGGAGGTGAACTCACGCATGATGAGGCAACGATTATCAGTGGAGCACTAGATCTCACTTTGAAGACTGCAGAGGAGGCTATGACACCAATTGAGTCAACTTTTTCCTTGGATGTTGATTCCAAATTGGACTGGGAAGCAATTGGGAAAATTCTTGAACGAGGTCATAGCCGTATCCCCGTATACAGTGGAAACCCCAAAAATATAATTGGCCTCTTACTAGTAAAAAATCTTCTTACTATAAGAGCTGAGACAGAGAGTCCAGTTAGTGCCGTCTCCATCCGGAACATTCCTAGGGTTCCATCAGATATGCCTTTATACGATATCCTCAACGAGTTTCAAAAAGGAAACAGTCATATGGCAGCTGTCGTCAAGGTTATGAGAGATAAAAACAACCCTCAGGAAGCTGGTGACTTTGACAAATCCAAGGATAAATTAGTCACCAAACATAGTTCTCAACTGAATGTGCCATTACTCGGGTCATATGAGAAATCACACAATGTTGTTGATATTGACAAACTTTCTCGGCATCATAACCCTGGAGGATGTAATGATGCCAAGAATGCAGACCAACAATGCCAAGAAAACGGCACTTCACCAAATAGTTTCCACCACTTTCCTTATAATGAAGATGGTGAAGTTATTGGCATCATAACCCTGGAAGATGTTTTCGAAGAACTCCTGCAGGAAGAAATCGTGGATGAAACAGATGTGTATATAGATGTTCATAGGAGAATACGTGTTGCTGCTGTCGCAGCTGCTTCTTCTGTGGCACGAGTTCATTTGGCCAAAAGTTGA 1398 0.417 MFSNSGGSGTAFPPGSFVYDADDVPFGTVWWFLYAGISCLLVLFAGIMSGLTLGLMSLGLVDLEILLRTGSSTQKKQAAAIFPILQKQHQLLVTLLLCNACAMEALPLYLDKIFHPVVAVLLSVTFVLAFGEVIPQAICTKYGLYVGANFVGLVRVLMIICYPIAYPIGKVLDILLGHHDVMFRRAQLKALVSIHSEEAGKGGELTHDEATIISGALDLTLKTAEEAMTPIESTFSLDVDSKLDWEAIGKILERGHSRIPVYSGNPKNIIGLLLVKNLLTIRAETESPVSAVSIRNIPRVPSDMPLYDILNEFQKGNSHMAAVVKVMRDKNNPQEAGDFDKSKDKLVTKHSSQLNVPLLGSYEKSHNVVDIDKLSRHHNPGGCNDAKNADQQCQENGTSPNSFHHFPYNEDGEVIGIITLEDVFEELLQEEIVDETDVYIDVHRRIRVAAVAAASSVARVHLAKS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02232 465 Pfam Cyclin M transmembrane N-terminal domain 37 208 IPR002550 -
Car03g02232 465 Gene3D - 391 435 IPR046342 -
Car03g02232 465 SUPERFAMILY CBS-domain pair 215 429 IPR046342 -
Car03g02232 465 CDD CBS_pair_CorC_HlyC_assoc 223 324 IPR044751 -
Car03g02232 465 PANTHER ANCIENT CONSERVED DOMAIN PROTEIN-RELATED 16 462 IPR045095 GO:0010960
Car03g02232 465 PANTHER BNAC05G01850D PROTEIN 16 462 - -
Car03g02232 465 Gene3D - 209 343 IPR046342 -
Car03g02232 465 ProSiteProfiles CNNM transmembrane domain profile. 27 209 IPR002550 -
Car03g02232 465 ProSiteProfiles CBS domain profile. 228 289 IPR000644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02232 Car-Chr3 68342205 68346672 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02232 K16302 - gmx:100777230 687.182
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02232 03 68342205 68346672 Car03g02232 03 68342205 68346672 ECH