Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02223 ATGGGTAAGATTCTCCGAGAAACCGCAAAGCCATCATCCAATTCATGGTCCCCATCTCCCTCATCGGAACCGGCGACAACCTCGTCAGCTTCGATCACGGAAACAGTGAGGGGTTCTCACCAGTTCAAGATCACGGGGTATTCGTTGTCGAAAGGGATCGGGATCGGGAAATATATAGCGTCGGATATATTCTCGGTTGGTGGGTATGATTGGGCTATCTATTTCTACCCTGATGGGAAAAGCGTTGAGGATAATGCTACCTACGTGTCCCTCTTCATTGCTCTTGCTAGCGAAGGAACCGATGTTAGGGCTCTTTTTGAGTTGACCCTTTTGGATCAGAGTGGGAAGGAGAGGCATAAGGTTCATAGCCATTTCGAAAGGACTCTTGAAAGCGGGCCTTATACCTTGAAATACCGCGGTAGTATGTGGGGTTACAAAAGGTTTTTTAAGAGAACGGCTTTAGAGACATCAGACTACCTTAAAGATGATTGCCTCTCTGTAAATTGTAGTGTTGGTGTTGTGAGGTCACGCACGGAAGGCCCGAAGATATATTCCATTGCAATACCACCTTCTGACATTGGCCAAAAATTTGGTCAACTTCTGGAAAGTGGAAAAGGAAGTGATGTGAGTTTTGAAGTGAATGGTGAAATTTTTACTGCTCATAAATTGGTGCTGGCAGCACGTTCACCTGTTTTCAGAGCCCAGCTTTTTGGTCCTATGAAAGATCAGAATACCCGGTGTATTAAAGTTGAAGACATGGAAGCTCCAGTTTTTAAGgcactgcttcattttatgtactgggattcactgcctgacatgcaagaacttactggaatgaactcaaaatgggcaacaaccttgatggcccaacatcttcttgcagctgctgatcggtatgccttggagaggcttaggcttatctgtgaagtgagtctatgtgaagatgttgcaataaatactgtggctacgactttagccttggcagaacagcaccactgtttccagctgaaaGCAGTTTGTCTCAAGTTTATTGCTACTTCCGAAAATCTCAGAGGTATGCTTTTCTTATCTAAACTTATACACTCAACTCAGTGGTACAGAAGCGTGAAGGAATCATATGGCTTTGCTTTGTGGTCATCCTTTTCCATTTACTGCCAATTTATCCATGCAATGCAGTTCATTGATTGCTCCAAGTTGACGCCCATGTCTAGTATGACTAGTTAA 1224 0.3546 MGKILRETAKPSSNSWSPSPSSEPATTSSASITETVRGSHQFKITGYSLSKGIGIGKYIASDIFSVGGYDWAIYFYPDGKSVEDNATYVSLFIALASEGTDVRALFELTLLDQSGKERHKVHSHFERTLESGPYTLKYRGSMWGYKRFFKRTALETSDYLKDDCLSVNCSVGVVRSRTEGPKIYSIAIPPSDIGQKFGQLLESGKGSDVSFEVNGEIFTAHKLVLAARSPVFRAQLFGPMKDQNTRCIKVEDMEAPVFKALLHFMYWDSLPDMQELTGMNSKWATTLMAQHLLAAADRYALERLRLICEVSLCEDVAINTVATTLALAEQHHCFQLKAVCLKFIATSENLRGMLFLSKLIHSTQWYRSVKESYGFALWSSFSIYCQFIHAMQFIDCSKLTPMSSMTS 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02223 407 MobiDBLite consensus disorder prediction 8 34 - -
Car03g02223 407 Gene3D - 310 374 - -
Car03g02223 407 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 19 354 IPR045005 GO:0016567
Car03g02223 407 CDD BTB_POZ_BPM_plant 193 313 - -
Car03g02223 407 ProSiteProfiles MATH/TRAF domain profile. 37 171 IPR002083 GO:0005515
Car03g02223 407 Gene3D Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A 36 175 IPR008974 GO:0005515
Car03g02223 407 SUPERFAMILY TRAF domain-like 34 173 - -
Car03g02223 407 Pfam BTB/POZ domain 198 314 IPR000210 GO:0005515
Car03g02223 407 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1-LIKE 19 354 - -
Car03g02223 407 CDD MATH 38 171 IPR002083 GO:0005515
Car03g02223 407 Gene3D Potassium Channel Kv1.1; Chain A 183 309 IPR011333 -
Car03g02223 407 ProSiteProfiles BTB domain profile. 207 266 IPR000210 GO:0005515
Car03g02223 407 SUPERFAMILY POZ domain 184 314 IPR011333 -
Car03g02223 407 SMART BTB_4 207 316 IPR000210 GO:0005515
Car03g02223 407 SMART math_3 42 154 IPR002083 GO:0005515
Car03g02223 407 MobiDBLite consensus disorder prediction 1 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02223 Car-Chr3 68244628 68247899 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02223 K10523 - gmx:102668882 642.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02223 03 68244628 68247899 Car03g02223 03 68244628 68247899 ECH