Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02216 ATGAATTTCTTCAAATCCGTTTTCTCAGACGACCCAGACCCTCAACAATCCCAATCCAACGACGCGCACCACACCGACTCGCCACACGCGCCAGAAAATCCCTCCGGCGCGTGGAACTTCGGCAAACTAATCAAAACCCTAAGCCAAAAATCTGAATCAGTCATCGAAATTTACCGCCGCGATCTTAACGAATTCGGCACCGGTTTAAAGAAAGAGATTGAGATCGCTCACGACTCTCTCGAAACGGTTGGCCACGTCATCGATCAATTCGGTAACACCGTCATCAAAGGAACGGCTCAGATCATATCTCAAGGTAGACACGCAATCATCGAATCCGATTCTCATGACAACAACAATAGCAACGATAAGAAACAGAGTaatttgaatttgaaattgtataatagatttgaatCTCAGGTTCGTGCAATTCAAGGTGATCCTAATACTTACACCGAAGAACCTGTTGATTTGGACCGTTATAATAAATGGAAATTGGAGTTTTCGTTGGAAGGGAAAACCGAAGAAATGGCAGGGTTTCTAAGAGAGAATGACGCCATGGAGAGTGTTTATAAAAGGGTGGTTCCTAATATTGTTGATAGTGAAACATTTTGGTTTAGATATTATTATAAGGTTTATAAGGTTAAAAAAGCTGAGGATGTGAGGGCTAGGCTTGTTAGACGAATGTCCAGGGAAGAGGAAGAAGAGTTGAGTTGGgatgttgaagatgatgatagtggtgattttgagataaatgacgacgatgatgatgatgCGGTGAGTATTAAGAGATTGAATACGGAAGAGGTGTGTGCTTCTGGTGGGGAAGAGTCTAGGGTTGAAAAGAGGATGGGGGAGTCTGTTGAGGAATCAAAAGTTGTTGAGGATTTGGAGGTTAATGATGAGAAGGGTGATGGAGGTCAAGTTGATAATGGTAAGGATTTGGATAAGAAAATGACGATGGATAAGGACGCCGGCGATGGAAAGTCTTTACCGGTTGTAAGTCAGAAGGAGGAGCATGGGGAGGAGGAGAAAGATCTTGAGTGGGATGAGATTGAGGATCTTAGTAGCATTGATGAAAAGAAGGGAATGGGGAGTGGTAGCCCAACCAAAGTTGATTTACTGAAAAGATTGAGTTCTGCGGCAGAAGAAGAAGAAGACTTGAGTTGGGATATTGAAGATGATGATGATGAGCTTGCCAAGGCTTGA 1206 0.4063 MNFFKSVFSDDPDPQQSQSNDAHHTDSPHAPENPSGAWNFGKLIKTLSQKSESVIEIYRRDLNEFGTGLKKEIEIAHDSLETVGHVIDQFGNTVIKGTAQIISQGRHAIIESDSHDNNNSNDKKQSNLNLKLYNRFESQVRAIQGDPNTYTEEPVDLDRYNKWKLEFSLEGKTEEMAGFLRENDAMESVYKRVVPNIVDSETFWFRYYYKVYKVKKAEDVRARLVRRMSREEEEELSWDVEDDDSGDFEINDDDDDDAVSIKRLNTEEVCASGGEESRVEKRMGESVEESKVVEDLEVNDEKGDGGQVDNGKDLDKKMTMDKDAGDGKSLPVVSQKEEHGEEEKDLEWDEIEDLSSIDEKKGMGSGSPTKVDLLKRLSSAAEEEEDLSWDIEDDDDELAKA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02216 401 Coils Coil 214 234 - -
Car03g02216 401 Pfam BSD domain 163 219 IPR005607 -
Car03g02216 401 MobiDBLite consensus disorder prediction 1 38 - -
Car03g02216 401 MobiDBLite consensus disorder prediction 237 255 - -
Car03g02216 401 Gene3D BSD domain 125 224 IPR035925 -
Car03g02216 401 SMART wurzfinal6 163 215 IPR005607 -
Car03g02216 401 MobiDBLite consensus disorder prediction 1 24 - -
Car03g02216 401 SUPERFAMILY BSD domain-like 132 220 IPR035925 -
Car03g02216 401 PANTHER SYNAPSE-ASSOCIATED PROTEIN 75 395 - -
Car03g02216 401 PANTHER SYNAPSE-ASSOCIATED PROTEIN 1 75 - -
Car03g02216 401 MobiDBLite consensus disorder prediction 273 324 - -
Car03g02216 401 ProSiteProfiles BSD domain profile. 163 215 IPR005607 -
Car03g02216 401 MobiDBLite consensus disorder prediction 237 401 - -
Car03g02216 401 PANTHER PROTEIN, PUTATIVE-RELATED 1 75 - -
Car03g02216 401 PANTHER PROTEIN, PUTATIVE-RELATED 75 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02216 Car-Chr3 68207605 68209165 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02216 - - mtr:MTR_7g094240 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02216 03 68207605 68209165 Car03g02216 03 68207605 68209165 ECH
Car03g02216 03 68207605 68209165 Car04g00821 04 8137122 8139016 PCT