Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02213 ATGATGACAAACGAAGAACTGATAGAGAAGCTTGAAGAGTTGACCAAGAACGCCAAACATCACCAATTGGACACTCTTCGTTCAATCCTTCTTCATAATGCCTCTGTTCGCTATCTTCAATCCTCCTTCAATAACAACAAGCTTCATCCTTCCACTTTCACACGTCATGTTCCTTTGTCTTCCTATGAAGATTACGTTCCCTTTATCCACCACTTGGCTCATCATCATGATGCAAAACTTCACCCTCTTCTCTCCGTTGATCCTCTTCTCTGCTTCTTCTATAGCTCAGGAACTACCTCCTTGAAACCAAAACTGATCCCTTACTTTGATTCAACCCTTTCAAAAGCTGCCTCCTTTCTTGGCCACCGAGGCAGTGCTGTTGTTCTTCAAAGGCTGTTTCCACCAAGGCCTAATGTCAACAAGATCCTAATGTTTTTCTATGCTGACAAAATCACTACCACAAAAAATGGCTTCAAGGTTATGGCAGCCTCTTCATACCCTATACAAAGTGGTAAGGTAACTTCTGAACAACTAGCCATGTTCTCTAGTCCCCCAGAAGTTATTCTTGGATCTAATGTGGAGCATCAAATGTATTGTCACCTTCTTTGTGGCCTTAGGAATCATGATGTTATAGATGGAATTAGTACTCCTTATGCCATAGGTTTGATTAAAGCATTTAGTCTTTTGGAATCTAAATGGGAGCAGCTATGTGATGATCTTAATTCTGGTTTTCCAAGTCATGAAATTTCAGATGTAGCAATGAGAGAAGCTGTAATCAACACACTTGGTGGTCCTCAACTAGATTTGTCAAATAGAATAAGGTTGGTTTGTGAAGGTAAGAATTGGAATGGAATTGTTCATAGAATGTTTCCGAATGTTCGTTTTATCAGGTGTGTTACGACTGGTAGCATGAAACAGTACTATAAAAAACTTAAGTTTTATGCAGGAGATGTACCTATTCTAGGAGGAGATTACTTTACTTCAGAGTGTTGTGTAGGTATAAATTTAGACATAATGCAACCGCCCGAGACAACGCGGTTTGTAATAGTTCCTACTTTTGCTTACTTTGAGTTTCTTCCATTTGAGATGAATGAGAATGAGCAAGATGTTTGTGAACAAACAGTGGACCTTACTAGTGTTGAGGTTGGGAAAATGTATGAAGTAGTTGTTACTACTTACCGAGGATTTTATCGATATAAATTGGGCGATATAGTGAGAGTTGTCGGTTTCCATAATTCATCGCCTGAAGTGGAATTTGTGATGAGGGCACCTAAGTCTTCAGCTGAGATTCTCACTGAGAAAGACTTGTTTTCAGCAGTTGAAAATTTTCAACTTGCACTCAGAGGTGCTGTGGATATCGAGATCGTTGAGTTCGCTAGTTTCTTGGATCAGGAACCGGTGTTGAAGCGATTGAAGGTATTTGTAGAAGTAGACGTTCAAGACAAATCTAATTTCTTGGAGGATAATTTGGATGAATGTGTTAAAATGTTTAAAAGTTGTGTTTCCTCTCTTGAGAGTGGTTTGGGAGCATTGTACAAGGCGCAGAGGGATAAAGGTCATTTAGGGAACTTAATGATAACTATCCTAAGGCATGGAGCTTTTAATCAGTTATTAGATTTGGCCATTAAGAATGGAACATCAGCTAGTCAATATAAACCACCTAAGATTATAAGGAATCATGAAATTGTCAAATTCTTGGAAAACTTAGCTTTTGCTACAATATCAATGGATGACTAA 1737 0.3874 MMTNEELIEKLEELTKNAKHHQLDTLRSILLHNASVRYLQSSFNNNKLHPSTFTRHVPLSSYEDYVPFIHHLAHHHDAKLHPLLSVDPLLCFFYSSGTTSLKPKLIPYFDSTLSKAASFLGHRGSAVVLQRLFPPRPNVNKILMFFYADKITTTKNGFKVMAASSYPIQSGKVTSEQLAMFSSPPEVILGSNVEHQMYCHLLCGLRNHDVIDGISTPYAIGLIKAFSLLESKWEQLCDDLNSGFPSHEISDVAMREAVINTLGGPQLDLSNRIRLVCEGKNWNGIVHRMFPNVRFIRCVTTGSMKQYYKKLKFYAGDVPILGGDYFTSECCVGINLDIMQPPETTRFVIVPTFAYFEFLPFEMNENEQDVCEQTVDLTSVEVGKMYEVVVTTYRGFYRYKLGDIVRVVGFHNSSPEVEFVMRAPKSSAEILTEKDLFSAVENFQLALRGAVDIEIVEFASFLDQEPVLKRLKVFVEVDVQDKSNFLEDNLDECVKMFKSCVSSLESGLGALYKAQRDKGHLGNLMITILRHGAFNQLLDLAIKNGTSASQYKPPKIIRNHEIVKFLENLAFATISMDD 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02213 578 Pfam GH3 auxin-responsive promoter 10 560 IPR004993 -
Car03g02213 578 Coils Coil 4 24 - -
Car03g02213 578 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 2 575 IPR004993 -
Car03g02213 578 PANTHER INDOLE-3-ACETIC ACID-AMIDO SYNTHETASE GH3.6-RELATED 2 575 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02213 Car-Chr3 68198803 68201049 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02213 11 573 EF-hand Containing Proteins AT1G23160 30.823 5.41e-93 295
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02213 K14487 - gmx:100786829 852.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02213 03 68198803 68201049 Car03g02213 03 68198803 68201049 ECH