Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02212 ATGAAGATGGAAATCAAAGAGGATGTGGAGGGTGGTACTCACAAAGGAATAACAGAACCATTATTGGAGGGGAAACACCATGCAAGAAAAGACCATCATCATCCATGGATGGTTTACTTCACCACATTCATTGCTGTTTGTGGTTCTTATGAATTTGGTGCTTGTGCTGGATACTCATCTCCAACTCAAGAAGCTATCAGGAAGGATCTTAGTCTATCTTTGGCAGAGTACTCCTTGTTCGGCTCCATCTTGACTTTCGGTGCGATGATTGGTGCAATAACAAGTGGTCCTATAGCTGATTTCGTTGGAAGAAAGGGGGCAATGAGAGTGTCAAGTGCTTTCTGTATTGCAGGGTGGCTTGTTATTTACTTTTCTCAGAATCCAGTGCCTTTGGATATTGGTAGACTAGCAACTGGATATGGAATGGGAGTTTTTTCATATGTGGTTCCTGTCTTTGTAGCAGAAATTGCGCCGAAAGAACTCCGAGGAGCCCTAACTACCTTAAATCAGTTCATGATTGTTACTGCTGTATCTGTCTCATTCATAATTGGAACTGTACTTTCATGGAGGGCTTTAGCTATAATTGGCCTCATTCCAACTGCTGTGTTGCTTTTGGGTCTGTTCTTTATTCCAGAATCTCCTAGATGGCTAGCAAAGAGAGGACGTGCAAAAGATTTTGTGGCAGCATTGCAAATACTTCGCGGTAAAGATGCTGATATATCTCAAGAGGCAGAAGAAATTCAGGATTATATAACTAGTTTAGATCGGCTGCCAAAACCGAAGGTGCTGGATTTGTTTCAAAGAAGATATTTACGCTCACTCACGATTGGAGTAGGACTTATGGTCTGCCAGCAATTTGGAGGAATCAATGGAGTTTGCTTTTACACTAGTAGTATATTTGACCTAGCAGGATTTCCTTCCTCGACCGGGAGTATAATTTATGCTATTCTTCAGATTGTGATCACAGGTGTTGGAGCAGCCCTCATAGATAAAGCAGGCAGGAAGCCCCTACTTTTGGTATCGGGATCAGGATTGGTTGCAGGATGTATATTAACAGCAGTTGCATTCTATCTTAAGGTTCATGATGTGGGTGCCGGGGCAGTCCCTGTGCTCGCTGTAACTGGCATATTGGTCTACATAGGATCATTTTCAATAGGAATGGGAGCAATTCCATGGGTTGTAATGTCCGAGATATTTCCTGTCAATATTAAAGGGCAGGCAGGAAGCATAGCCACATTAGTGAATTGGTTTGGTGCTTGGTTATGTTCTTATACTTTTAACTTTCTCATGAGTTGGAGCTCCTATGGTACCTTTGTTCTTTATGCTGCAATCAACTCACTAGCTATATTATTTATAGCTATAGTAGTGCCAGAAACCAAAGGTAAGAGTCTTGAACAATTACAGGCAGCCATTAACGCGTAG 1422 0.4198 MKMEIKEDVEGGTHKGITEPLLEGKHHARKDHHHPWMVYFTTFIAVCGSYEFGACAGYSSPTQEAIRKDLSLSLAEYSLFGSILTFGAMIGAITSGPIADFVGRKGAMRVSSAFCIAGWLVIYFSQNPVPLDIGRLATGYGMGVFSYVVPVFVAEIAPKELRGALTTLNQFMIVTAVSVSFIIGTVLSWRALAIIGLIPTAVLLLGLFFIPESPRWLAKRGRAKDFVAALQILRGKDADISQEAEEIQDYITSLDRLPKPKVLDLFQRRYLRSLTIGVGLMVCQQFGGINGVCFYTSSIFDLAGFPSSTGSIIYAILQIVITGVGAALIDKAGRKPLLLVSGSGLVAGCILTAVAFYLKVHDVGAGAVPVLAVTGILVYIGSFSIGMGAIPWVVMSEIFPVNIKGQAGSIATLVNWFGAWLCSYTFNFLMSWSSYGTFVLYAAINSLAILFIAIVVPETKGKSLEQLQAAINA 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02212 473 ProSitePatterns Sugar transport proteins signature 1. 325 342 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car03g02212 473 ProSitePatterns Sugar transport proteins signature 1. 95 112 IPR005829 GO:0016021|GO:0022857|GO:0055085
Car03g02212 473 MobiDBLite consensus disorder prediction 1 20 - -
Car03g02212 473 SUPERFAMILY MFS general substrate transporter 31 467 IPR036259 -
Car03g02212 473 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 460 IPR020846 GO:0022857
Car03g02212 473 PANTHER - 34 472 - -
Car03g02212 473 Pfam Sugar (and other) transporter 49 469 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car03g02212 473 PRINTS Sugar transporter signature 132 151 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car03g02212 473 PRINTS Sugar transporter signature 284 294 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car03g02212 473 PRINTS Sugar transporter signature 373 394 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car03g02212 473 PRINTS Sugar transporter signature 396 408 IPR003663 GO:0016020|GO:0022857|GO:0055085
Car03g02212 473 Gene3D MFS general substrate transporter like domains 31 472 IPR036259 -
Car03g02212 473 PANTHER SUGAR TRANSPORTER ERD6-LIKE 7 34 472 - -
Car03g02212 473 CDD MFS_GLUT6_8_Class3_like 39 466 IPR044775 GO:0008643|GO:0051119
Car03g02212 473 TIGRFAM SP: MFS transporter, sugar porter (SP) family 36 466 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02212 Car-Chr3 68194239 68198535 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02212 3 472 Organic Solute Cotransporters AT5G18840 57.829 0.0 552
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02212 K03444 - gmx:100785248 808.135
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02212 03 68194239 68198535 Car03g02212 03 68194239 68198535 ECH