Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02207 ATGGCTTCTTCTGATGCAACAGCAACATCCAAGAAAGGTGGAAGAGGCAAATCAAAAACCAAATCTGTTTCAAGATCAAGCAAAGCCGGTCTCCAGTTTCCCGTTGGCCGCATCGCTCGTTTCCTTAAAGCCGGTCGTTATGCTCAGCGTGTTGGATCTGGTTCACCAGTTTATCTCTCTGCAGTTCTTGAATATCTTGCTGCTGAGGTTTTGGAACTTGCTGGCAATGCTGCGAGGGATAACAAGAAGACGAGGATTATTCCGAGGCACATTCAACTTGCTGTTAGGAACGATGAGGAATTGGGCAAGTTGATGGGATCTGTTACAATTGCCAATGGGGGTGTTTTGCCTAACATTCATCAGAATTTGTTACCGAAGAAAGTTGCTGGAAAGGGGAAAGGAGAAATTGGATCTGTTAGTCAGGAGTTTTAG 432 0.4514 MASSDATATSKKGGRGKSKTKSVSRSSKAGLQFPVGRIARFLKAGRYAQRVGSGSPVYLSAVLEYLAAEVLELAGNAARDNKKTRIIPRHIQLAVRNDEELGKLMGSVTIANGGVLPNIHQNLLPKKVAGKGKGEIGSVSQEF 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02207 143 SUPERFAMILY Histone-fold 13 130 IPR009072 GO:0046982
Car03g02207 143 SMART h2a4 10 130 IPR002119 GO:0000786|GO:0003677|GO:0030527
Car03g02207 143 Pfam C-terminus of histone H2A 99 133 IPR032454 -
Car03g02207 143 Pfam Core histone H2A/H2B/H3/H4 14 96 IPR007125 GO:0003677
Car03g02207 143 PANTHER HISTONE H2A 8 141 - -
Car03g02207 143 CDD H2A 12 127 IPR002119 GO:0000786|GO:0003677|GO:0030527
Car03g02207 143 Gene3D Histone, subunit A 8 134 IPR009072 GO:0046982
Car03g02207 143 MobiDBLite consensus disorder prediction 1 28 - -
Car03g02207 143 PANTHER HISTONE H2A 8 141 IPR002119 GO:0000786|GO:0003677|GO:0030527
Car03g02207 143 PRINTS Histone H2A signature 21 43 IPR002119 GO:0000786|GO:0003677|GO:0030527
Car03g02207 143 PRINTS Histone H2A signature 50 65 IPR002119 GO:0000786|GO:0003677|GO:0030527
Car03g02207 143 PRINTS Histone H2A signature 65 78 IPR002119 GO:0000786|GO:0003677|GO:0030527
Car03g02207 143 PRINTS Histone H2A signature 79 93 IPR002119 GO:0000786|GO:0003677|GO:0030527
Car03g02207 143 PRINTS Histone H2A signature 107 125 IPR002119 GO:0000786|GO:0003677|GO:0030527
Car03g02207 143 ProSitePatterns Histone H2A signature. 29 35 IPR032458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02207 Car-Chr3 68159277 68160019 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02207 K11251 - gmx:100787899 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02207 03 68159277 68160019 Car03g02207 03 68159277 68160019 ECH