Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02192 ATGGACGACGAAGAAGAGCAAAAGAAGCTTCCAGATCTAGTAAAAGCACTAGTCCACAATCTCCTCTCTCAAAAACTTCCCCCAAATTCCCCACCCTTAAACCCTAACTCCCCCGAATTTCAAAACTCCCTCCGTTACGCTCACCGCATTCTCTCCAGCCACCTCACTCCCTCCATAACACCCGACGCCGCATCAATCGCCGAATCCATCAAACGCCGTCTCGCCACCCAAGGTAAATCCTCCGAAGCCCTCTCTTTCGCTGACCTATACACCAAATTCGCTTCCAAAGCCACCGATGTTGATAACAAGTGGGCCCTACTTCACCTCTTCAATATCATCTCACAAGATCGTAAAACCGCCGCTAAGTCTCAACTCGACGCTTCCAATCTTCTTCCCAATTTAACCCTATCCGATAACAACGTTACACGGCGCATCGATAATAGGGGGTGGAACGACGGCGTTTTGCTTCTCGCTAAGGATCCTGAGAATCGACGTGATATTGCGTTTCGTGAGTTTGTGAAATTGGTGAAGGAAGAAAATGATGTTACTGAGGAGGCTATGGTAACTGATGTGCTTTATGCTTGTCAGGGAGTTGATGGTAAGTACGTGAAATTCGATAGTGAAGATGATTGTTATGTTTTATTGGACTCAGTTAGGGTTTCTAGGTCTACTAGGAGTATGGTTCATAAGCTTTGTGAATTGGGGGTTTTGTTTAAGAAGGTTATTGGGTATATTAAGCAGAGTATGGATCGTTTTCCGGCGGAAGATGTGGGGACGGTTGGTCAGGCTTTTTGTTCTGCATTGCAGGATGAGTTGTGCGAATATTATAAGTTGTTGGCTGTGCTTGAGGCGCAGTCTTCGAATCCGGTTCCTTTGTTGTGTGAATCGGCCAGTTCCAGAAACTATCTTTCGCTTAGGAGATTGGCGGTCTGGGTTGCGGAGCCAATAGTGAAGATGAGGTTGATGGCTGATTTGGTTGAGAAGTGTAGGGTTTTACGGGGTGGGGCGATGGCTGGTGCGATTCATTTGCACGCACGGCATGGGGATCCGCTGGTTCACGAGTTCATGAAGAGATTGCTTCAGCGTGTGTGTTCTCCGCTTTTTGAAATGGTGAGGAGGTGGGTTTTGGAAGGGGAGTTGGAAGATATTTTTGCTGAGTTTTTCATTGTTGGGCAGCCTGTGAAAGCTGAATCCCTTTGGAGAGAGGGATATAGGCTCCATGATGCCATGCTTCCTTCTTTTATTTCAGCTTCTCTTGCTCAGCGGATTTTGAGGACTGGAAAGTCCATAAATTTTCTTCGTGTTTGCTGCGAGGACCGTGGTTGGGCTCGTGCCGCAACTGAAGTTGCCACTGATACAGGGGCCACGGCTAGACGCGGTGGTTTTGGTTATGGTGAAACTGATACCCTCGAGTCATTGGTTGATGAAGCTTCAAAAAGAATTGACAAGCATCTATTGGATGTAATTTACGATAGGTATAAATTCAAAGAGCATTGTCTTGCGATTAAGCGGTATTTGTTGCTTGGCCAAGGTGATTTTGTGCAATATCTAATGGATATTGTTGGGCCTGAACTTTCTGTGCCAGCTAACACGATAAGCTCTTTCAAACTTGCGGGATTGCTGGAAACTGCCATCCGGGCCTCAAATGCTCAGTATGATGACCCTGATATTTTGGACAGGCTCAGGGTCAAAATGATGCCACATGAAAGTGGTGATAGGGGCTGGGATGTATTCTCACTTGAATATGATGCAAGAGTTCCACTAGATACTGTGTTCACAGAGTCTGTGATGGCGAGGTATTTAAGAATTTTTAATTTTCTATGGAAGCTTAAAAGAGTGGAACATGCACTTATTGGTGCCTGGAAGACCATGAAACCAAACTGTATAACTTCTAATTCCTTTATTAGATTGCAAAGTACAGTAAAGATGCAGTTAGTTTCGGCATTGAGGCGCTGCCAAGTTCTTTGGGTTGAAATCAATCACTTCATTTCAAACTTGCAATACTATATAATGTTTGAAGTCTTGGAGATATCATGGTCAAACTTTTTAAGTGAGATGGAAGTAGCCAAGGATCTTGACGATCTACTTGCAGCTCATGAGAAATATATGAATTCAATTGTAGAGAAATCTCTCCTTGGAGAACTCTCTCAGTCCCTTTACAAGTCACTAATAGTAATATTTGATCTTATATTACGTTTTCGGAGCCATGCAGATCTTTTGTACGAAGGTATTCACGAGTTGCAAGCAAGAATCACAGAGTCCTCCCTATCCTCTAGAGACCAGAAGAAAACACGAAAGCAATTGAATGATAAGTCTGCAGAACAAGGATCCTGGATAGCTGATGGAAGGAAAGCCTTAACTCAACGTGCGGGTGAATTTCTTCGAAAAATGGAACAAGATCTGGATGCAATTTCGAAGGAGTATTCATCATTGCAAGAGGAATTCATTTCTCAGTTGCCTGTACAGCAGCATGTTGATCTAAAGTTCCTCTTTTTCCGTCTTGACTTCAATGAATTTTATAGGCGGGTTGTGTCCTAG 2538 0.4401 MDDEEEQKKLPDLVKALVHNLLSQKLPPNSPPLNPNSPEFQNSLRYAHRILSSHLTPSITPDAASIAESIKRRLATQGKSSEALSFADLYTKFASKATDVDNKWALLHLFNIISQDRKTAAKSQLDASNLLPNLTLSDNNVTRRIDNRGWNDGVLLLAKDPENRRDIAFREFVKLVKEENDVTEEAMVTDVLYACQGVDGKYVKFDSEDDCYVLLDSVRVSRSTRSMVHKLCELGVLFKKVIGYIKQSMDRFPAEDVGTVGQAFCSALQDELCEYYKLLAVLEAQSSNPVPLLCESASSRNYLSLRRLAVWVAEPIVKMRLMADLVEKCRVLRGGAMAGAIHLHARHGDPLVHEFMKRLLQRVCSPLFEMVRRWVLEGELEDIFAEFFIVGQPVKAESLWREGYRLHDAMLPSFISASLAQRILRTGKSINFLRVCCEDRGWARAATEVATDTGATARRGGFGYGETDTLESLVDEASKRIDKHLLDVIYDRYKFKEHCLAIKRYLLLGQGDFVQYLMDIVGPELSVPANTISSFKLAGLLETAIRASNAQYDDPDILDRLRVKMMPHESGDRGWDVFSLEYDARVPLDTVFTESVMARYLRIFNFLWKLKRVEHALIGAWKTMKPNCITSNSFIRLQSTVKMQLVSALRRCQVLWVEINHFISNLQYYIMFEVLEISWSNFLSEMEVAKDLDDLLAAHEKYMNSIVEKSLLGELSQSLYKSLIVIFDLILRFRSHADLLYEGIHELQARITESSLSSRDQKKTRKQLNDKSAEQGSWIADGRKALTQRAGEFLRKMEQDLDAISKEYSSLQEEFISQLPVQQHVDLKFLFFRLDFNEFYRRVVS 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02192 845 Coils Coil 794 814 - -
Car03g02192 845 Pfam Gamma tubulin complex component C-terminal 497 840 IPR040457 GO:0043015
Car03g02192 845 Pfam Gamma tubulin complex component N-terminal 188 491 IPR041470 -
Car03g02192 845 PANTHER GAMMA TUBULIN COMPLEX PROTEIN 32 835 IPR007259 GO:0000226|GO:0000922|GO:0005815|GO:0007020|GO:0043015
Car03g02192 845 PANTHER GAMMA-TUBULIN COMPLEX COMPONENT 32 835 - -
Car03g02192 845 Gene3D - 496 839 IPR042241 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02192 Car-Chr3 68015013 68018926 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02192 K16570 - gmx:100784710 1381.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02192 03 68015013 68018926 Car03g02192 03 68015013 68018926 ECH