Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02190 ATGGCGAAATACGGCGAGGGAGATAAACGGTGGATCGTCGAAGAAAGACCCGACGGCACCAACGTCCACAACTGGCACTGGTCCGAAACCAACTGTCTAGAATGGTCTAGAACCTTCTTCACCAACCTTCTTTCCAACCTCACCATTCTCAACGGCGAAGGTAACCTCTTCATCAAAACCACCACTATCCGTAACCTCAACGGCGAAGCCTACATCAACATCCGTAAGGGGAAAATCATCCCCGGCTACGAAATCAGCCTCACACTTTCCTGGGAAGGTGAGGCAAGAGATTCTGATGGTAAGTCGTTGCTTAAAGTTAACGGCACCGTCGAAATTCCTTATATCTCCGACGAAAACGCGGATGAGGATCCCGAACTTAGGGTTATTGTTGAAGATGAAGGACCGATTGGGAAGAGGATTAAGGATGCCATGTTTTCTAAGGGGAAGTTGTTGATTTTGGAGAAGGTTAGGGTTTGGGTTCAGAGTATGGCCAAAGGTGGTCCTGTTAAAGAAGAGTTGGATACTAAGAAGCCATTGCCGCAACCATTGAATCAGAATCAGAATTGTGCTCCGGTGGTGACGGCGGCGAATGCTTCTGTTAAAAaggaggataaggtggctgaaaagaagaaggcgaaggagaaggagagtaagaagggacggaaaagTATTGTGTTGACGGAGAGGTTTAATTGTAGGGCGAAGGATTTGTATGAGATATTGATGGATGAAAATAGGTGGAAGGGTTTTACGCAGAGCAATGCTAGGATTAGTAAGGAGGTTGGTGGTGAAATCAGTATTTTTGATGGGTCTGTTACTGGTTCTAATTTGGAGTTGCAAGAAGCTAAATTGATTGTTCAGAGATGGAGATTTGGAAGCTGGATTGATGGCGTTCAATCTCAGGTGAGGCTTGTTTTCGAGGAGCCTGAACCGGGGGTTACTGTTGTTAAGCTGACACATACTGATGTACCTGAGGAAGATAGGTATGGGAATGCTACTGTGGTGGAGAACACTGAAAGGGGATGGCGGGAGCTTATTTTCCAAAGAATACGTGCTGTTTTTGGTTTTGGAATTTGA 1077 0.4299 MAKYGEGDKRWIVEERPDGTNVHNWHWSETNCLEWSRTFFTNLLSNLTILNGEGNLFIKTTTIRNLNGEAYINIRKGKIIPGYEISLTLSWEGEARDSDGKSLLKVNGTVEIPYISDENADEDPELRVIVEDEGPIGKRIKDAMFSKGKLLILEKVRVWVQSMAKGGPVKEELDTKKPLPQPLNQNQNCAPVVTAANASVKKEDKVAEKKKAKEKESKKGRKSIVLTERFNCRAKDLYEILMDENRWKGFTQSNARISKEVGGEISIFDGSVTGSNLELQEAKLIVQRWRFGSWIDGVQSQVRLVFEEPEPGVTVVKLTHTDVPEEDRYGNATVVENTERGWRELIFQRIRAVFGFGI 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02190 358 Pfam Activator of Hsp90 ATPase, N-terminal 29 165 IPR015310 GO:0001671|GO:0051087
Car03g02190 358 SUPERFAMILY Bet v1-like 223 357 - -
Car03g02190 358 SUPERFAMILY Activator of Hsp90 ATPase, Aha1 20 165 IPR036338 -
Car03g02190 358 SMART Aha1_N_2 29 165 IPR015310 GO:0001671|GO:0051087
Car03g02190 358 Gene3D - 221 357 IPR023393 -
Car03g02190 358 PANTHER HEAT SHOCK PROTEIN 90 HSP90 CO-CHAPERONE AHA-1 1 358 IPR039981 GO:0001671|GO:0051879
Car03g02190 358 Gene3D - 18 175 IPR036338 -
Car03g02190 358 Pfam Activator of Hsp90 ATPase homolog 1-like protein 234 354 IPR013538 -
Car03g02190 358 PANTHER ACTIVATOR OF 90 KDA HEAT SHOCK ATPASE-LIKE PROTEIN 1 358 - -
Car03g02190 358 Coils Coil 195 215 - -
Car03g02190 358 CDD SRPBCC_Aha1 223 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02190 Car-Chr3 68000407 68002737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02190 - - gmx:100812897 580.867
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02190 03 68000407 68002737 Car03g02190 03 68000407 68002737 ECH
Car03g02190 03 68000407 68002737 Car04g02147 04 28778072 28780430 PCT