Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02187 ATGGCTGATGCCACTAAGTATGTTCCCATAGGTGGTGGGAACTTACACACTACAACATTAGACCTCAAAAACCTCTTCTCCATTCTCAAAACAAGAACAACACTTGCTTTTGCTTATGTTTTTATCTTTCTTTTCATTGCTTTCACTGTTTTCTTAGCTTTTTCTCCTTCTCCAAATGCTTCTTCACCTTGGTTCACCAACATATTCTCACCCTCATCATCTACAACTTCACCAACTTCATCAAAATCTCAACTTTCTTCCATTTTCTCATACTTTTTCCCCAACACCAACAACACCAATGTTTCTTATCCTTTTGATCCTCTTCAAAACAACACTTCTAGTACTAGATCTACCAATGCAACTTCTCTTTCTCAATCTCATATTCCAAACACAATTGAAaaaactatcaatagtaacataacctctgttcaaaactcatcacaagatgcagttcctgttcctgttcctgtTCAAATTCCAATTCCAAACACAAACAATACCAAAATTACCAACCTCACTTCTCAAATTGTTAAAAAGGAACCATCTTTTGTAATAAATCAAACTTCCCATTCTGATGAAGCTATAGCCAAAGACAAAGCTATGAACTCAAATCAAACAAAAAATGCTACTGCTGAAGGAGTTCCAATTACTCCTAACAAGAATTTGAGTTCTAATTCTTCTTCATTGAAGGATGTTGTGTTGAATAATTACACAGCTTCTCTTGCTAAGAAACAGAACAACaaacatgaagaaaagaagaaagacgagtggatggagtctttgatgaagtgtgatttttttgatggagaatgggttaaggatgattcttatccactttataagccaggttcttgttctgtgattgatgaacagttcaattgtattggaaatggaagacctgataaagattatcagaaatataaatggaaacctaagggatgcagcctcccaaggttggatggacataaaatgcttgatttgttaagaggcaagagattggtttttgttggtgattctctcaataggaatatgtgggaatcacttatttgtatactaagaaattctgtgaaagataaaagaaaagtttatgaagcaaatggaagagtccattttagaggggaagcctcttattcatttgtattTCAGGATTATAAATTCTCTGTGGAGCTTTTTGTGTCTCCATTTTTAGTTCAAGAGTGGGAAATGCCTGATAAAAATGGAACAAAGAAGGAAACACTTCGTCTCGATTTAGTTGGAAGATCTTCAGATCAATATAAAGATGCAGATATCATTGTTTTTAATACTGGTCACTGGTGGACTCATGATAAAACTTCTAAAGGGAAGGACTATTACCAAGAAGGTAGCCATGTCTATGATGAATTGAATGTTCTTGAGGCGTTTCGAAGAGCTATAACAACTTGGAGCAGGTGGGTTGATGCCAATGTAAATCCATCCAAGTCCATAGTCTTGTTTAGAGGCTATTCTGCTTCTCATTTCAGTGGTGGACAATGGAATTCCGGCGGACAATGTGACAGTGAAACGGCACCCATCGATAACGAGAAGTACCTAACGGAGTACCCGCCTAAGATGAGAGTGTTGGAGAAGGTTTTGAATAACATGAAAACTCATGTAACCTACCTGAATATCACTAGAATGACAGATTTCAGGAAGGACGGTCATCCCTCGATATACAGGAAGCATAATCTGTCACCCGAAGAACAAAAATCGCCGTTGAGATTCCAAGACTGCAGTCATTGGTGCCTTCCGGGCGTTCCCGACACATGGAATGAGATTCTCTACGCCGAACTTCTAATCAGAGAATATCGAAATCAGCAACAGAAGAAGAGAACATAG 1854 0.2864 MADATKYVPIGGGNLHTTTLDLKNLFSILKTRTTLAFAYVFIFLFIAFTVFLAFSPSPNASSPWFTNIFSPSSSTTSPTSSKSQLSSIFSYFFPNTNNTNVSYPFDPLQNNTSSTRSTNATSLSQSHIPNTIEKTINSNITSVQNSSQDAVPVPVPVQIPIPNTNNTKITNLTSQIVKKEPSFVINQTSHSDEAIAKDKAMNSNQTKNATAEGVPITPNKNLSSNSSSLKDVVLNNYTASLAKKQNNKHEEKKKDEWMESLMKCDFFDGEWVKDDSYPLYKPGSCSVIDEQFNCIGNGRPDKDYQKYKWKPKGCSLPRLDGHKMLDLLRGKRLVFVGDSLNRNMWESLICILRNSVKDKRKVYEANGRVHFRGEASYSFVFQDYKFSVELFVSPFLVQEWEMPDKNGTKKETLRLDLVGRSSDQYKDADIIVFNTGHWWTHDKTSKGKDYYQEGSHVYDELNVLEAFRRAITTWSRWVDANVNPSKSIVLFRGYSASHFSGGQWNSGGQCDSETAPIDNEKYLTEYPPKMRVLEKVLNNMKTHVTYLNITRMTDFRKDGHPSIYRKHNLSPEEQKSPLRFQDCSHWCLPGVPDTWNEILYAELLIREYRNQQQKKRT 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02187 617 MobiDBLite consensus disorder prediction 109 128 - -
Car03g02187 617 Pfam PMR5 N terminal Domain 263 314 IPR025846 -
Car03g02187 617 PANTHER PMR5/CAS1P GDSL/SGNH-LIKE ACYL-ESTERASE FAMILY PROTEIN 22 610 - -
Car03g02187 617 MobiDBLite consensus disorder prediction 198 227 - -
Car03g02187 617 Coils Coil 234 254 - -
Car03g02187 617 PANTHER PROTEIN TRICHOME BIREFRINGENCE-LIKE 9-RELATED 22 610 IPR029962 GO:0016413
Car03g02187 617 Pfam GDSL/SGNH-like Acyl-Esterase family found in Pmr5 and Cas1p 316 601 IPR026057 GO:0016740
Car03g02187 617 MobiDBLite consensus disorder prediction 197 227 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02187 Car-Chr3 67973128 67976581 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02187 - - gmx:100811425 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02187 03 67973128 67976581 Car03g02187 03 67973128 67976581 ECH
Car03g02187 03 67973128 67976581 Car04g02150 04 28851465 28854965 PCT