Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02173 ATGGGAGCTGGTGGCCGAACCTCTGTTCCTCCTCAAAACAGGAAGTCAGAGAATGACACTGTGAAGCGGGTGCCATCTGAAAAACCGCCATTTAGTCTCAGCCAGCTCAAGAAGGCCATTCCACCTCACTGTTTTAAGCGTTCTGTTATACATTCATTCTCCTATGTCGTTTATGACCTCACCATAGCCTTCTTCCTCTATTACGTTGCCACTCATTACATCCAACACCTTCCTCGCCCTCTATCTTTCTTGGCCTGGCCTGCCTACTGGGCTATCCAAGGTTGCATCCTTACAGGTGTTTGGGTCATTGCGCATGAGTGTGGCCACCATGCATTCAGTGACTATCAATGGCTTGATGATACAGTTGGCCTCATTCTCCACTCTGCCCTTCTAGTCCCTTACTTTTCTTGGAAATACAGCCATCGCCGCCACCATTCCAACACTGGTTCTCTTGAGCGGGATGAAGTATTTGTGCCCAAGCAGAAGTCTGGTACCTATTGGTACTCCAAATATCTTAGCAACAACCCACTAGGCAGAGTCCTCACAATTACTATCACCCTTACCCTTGGCTGGCCCCTTTACTTGGCTCTCAATGTTTCAGGCAGGCCTTATGATAGGTTTGCTTGCCACTTTAACCCATATGGTCCCATTTACTCAGATCGTGAGCGTCTACAAATATATGTATCAGATGCAGGAATCCTTGCAGTATGCTATGGGCTTTATCTTCTCGCCATGGCTAAAGGACTTGCCTGGGTTGTGTGTGTTTATGGAGTTCCACTGCTAGTAGTCAATGGATTCTTGGTGCTGATTACATTTTTGCAGCATACTCACCCTGCGTTGCCACATTACGATTCCTCTGAGTGGGACTGGTTGAGAGGAGCTTTAGCAACAGTGGACAGGGATTATGGTATCCTGAACAAGGTCTTCCATAATATTACTGACACTCATGTGGCTCATCACTTGTTCTCCACAATGCCACATTATCATGCAATGGAGGCTACCAAGTCAATAAAACCAGTTTTGGGAGAGTATTATCGGCTTGATGAAACACCATTTTACAAGGCATTATGGAGAGAAGCAAGAGAGTGTGTCTACGTTGAGCCAGATCAAGGTACTGAGAAGAAAGGTGTATTCTGGTACAACAATAAGTGGTGA 1155 0.4615 MGAGGRTSVPPQNRKSENDTVKRVPSEKPPFSLSQLKKAIPPHCFKRSVIHSFSYVVYDLTIAFFLYYVATHYIQHLPRPLSFLAWPAYWAIQGCILTGVWVIAHECGHHAFSDYQWLDDTVGLILHSALLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSGTYWYSKYLSNNPLGRVLTITITLTLGWPLYLALNVSGRPYDRFACHFNPYGPIYSDRERLQIYVSDAGILAVCYGLYLLAMAKGLAWVVCVYGVPLLVVNGFLVLITFLQHTHPALPHYDSSEWDWLRGALATVDRDYGILNKVFHNITDTHVAHHLFSTMPHYHAMEATKSIKPVLGEYYRLDETPFYKALWREARECVYVEPDQGTEKKGVFWYNNKW 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02173 384 CDD Delta12-FADS-like 47 330 - -
Car03g02173 384 Pfam Fatty acid desaturase 85 346 IPR005804 GO:0006629
Car03g02173 384 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 384 - -
Car03g02173 384 PANTHER OLEATE HYDROXYLASE FAH12 1 384 - -
Car03g02173 384 Pfam Domain of unknown function (DUF3474) 22 65 IPR021863 GO:0016717
Car03g02173 384 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02173 Car-Chr3 67874666 67880496 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02173 1 383 Lipid Metabolism Gene Families AT3G12120 77.285 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02173 K10256 - gmx:547815 724.546
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02173 03 67874666 67880496 Car03g02173 03 67874666 67880496 ECH
Car03g02173 03 67874666 67880496 Car04g02159 04 29364140 29366873 PCT