Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02150 ATGGCAACCGCTGTGCTACGCTTATTTTTGCTTCTGATATTGCTAACGTGTGCAATCTCAGAATTATGCAACCCACAAGATAAAAAAGTTTTGCTCCAAATAAAGAAAGATCTCAACAACCCTTACCTTCTAGCCTCATGGAACCCAGACACGGATTGTTGCACTTGGTACACCGTCGATTGTGACCCCAAAACGCACCGTATTATCTCCCTCACTATTTTCTCTTCCGTACCAGAAACCAATTTCTCCGCCCAAATCCCTCCCTCCGTGGGCCTGCTCCCATACTTAGAGACTCTCGAGTTCCATAAACTTCCAAAGCTAACAGGCCCACTCCAGCCCACAATTGCCAAACTAACAAACCTCAAGTTCCTCCGTATCAGTAATACCAACTTATCGGGCTCGGTTCCTTCTTTCTTGGCCCAACTCACAAACCTCACATTTTTGGATCTATCTTTCAACAACCTCACCGGTTCAATCCCCGGTTCACTCTCTCAACTTCCCAACCTCAACGCCCTCCACTTGGACCGTAACCACTTAACCGGTTCGATCCCTTCTTCGTTCGGTTCGTTTAAGTCCAACCCAGATATCTACCTTTCCCACAACAACCTCACTGGGCCCATCCCACCCACATTAGGGAACCTCAATTTAACTACCATCGACTTGTCGCGGAACAAGCTCGAGGGAGACGCGTCTTCGATTTTCGGGCCCAATAAAACTGTCCAAATAGTGGATCTATCGAGGAATCAACTATCGTTCGATCTGTCGGAGGTGGAGTTTCCCGCGAGTCTAACGTCGTTGGATCTAAATCATAATAAGGTGTATGGGAAGCTTCCTGAGGGTTTGACCGCACTAAATCTGCAGTATCTGAACGTGAGTTACAATAGGTTGTGTGGTCAGATTCCGGTTGGTGGAGATTTGCAAAGTTTTGATATTTATTCTTATTTTCATAATAAGTGCTTGTGTGGATCTCCGCTTCCCAAATGTACATGA 990 0.4606 MATAVLRLFLLLILLTCAISELCNPQDKKVLLQIKKDLNNPYLLASWNPDTDCCTWYTVDCDPKTHRIISLTIFSSVPETNFSAQIPPSVGLLPYLETLEFHKLPKLTGPLQPTIAKLTNLKFLRISNTNLSGSVPSFLAQLTNLTFLDLSFNNLTGSIPGSLSQLPNLNALHLDRNHLTGSIPSSFGSFKSNPDIYLSHNNLTGPIPPTLGNLNLTTIDLSRNKLEGDASSIFGPNKTVQIVDLSRNQLSFDLSEVEFPASLTSLDLNHNKVYGKLPEGLTALNLQYLNVSYNRLCGQIPVGGDLQSFDIYSYFHNKCLCGSPLPKCT 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02150 329 PANTHER POLYGALACTURONASE INHIBITOR 2 6 328 - -
Car03g02150 329 ProSiteProfiles Leucine-rich repeat profile. 144 166 IPR001611 GO:0005515
Car03g02150 329 SUPERFAMILY L domain-like 22 327 - -
Car03g02150 329 Pfam Leucine rich repeat N-terminal domain 25 62 IPR013210 -
Car03g02150 329 Pfam Leucine rich repeat 215 272 IPR001611 GO:0005515
Car03g02150 329 Pfam Leucine rich repeat 120 179 IPR001611 GO:0005515
Car03g02150 329 Gene3D Ribonuclease Inhibitor 21 329 IPR032675 -
Car03g02150 329 PRINTS Leucine-rich repeat signature 145 158 - -
Car03g02150 329 PRINTS Leucine-rich repeat signature 166 179 - -
Car03g02150 329 PANTHER POLYGALACTURONASE INHIBITOR 1 6 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02150 Car-Chr3 67723368 67724630 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02150 63 323 Receptor kinase-like Gene Family AT4G08850 31.818 1.92e-26 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02150 - - aprc:113862147 553.903