Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02139 ATGTCTTCTATTTGTAAGAGTCAGTTGGAAACCTGGATTTTCTTCGGCCAGAAAGGAAGAAGAATTGAAAAAGGACGctccgcacctccgcctctgctgttcgtcaaaaaagGCCAAATGGCACCAAGATGGAAAGGAAAAGATGCAAAATCGAAAAAGGATGCAGAAGCTGAGGCACTTAAAGAACCCATGTCAAAGATTATATCACAACTTCACACTTCTTTAGTTCTATCAAATACTTGTGGATTTCTCTGTGATAACTCTGTACACTTAGCAGTGCAAGCAGAACAGCTTGACCTGCTCGATAAAGCATGCTTTGGTCGACCTGTGAGATCAGTTGAAAAGGACATGTACTGGTTTCAATTAAGTTTAGAGGAAGCATTCTACCTATGTTATTCCTTGAAGTGCCTCAAGATTAATGGTGGTAGTGATACTGGCCCCTCAAATGATGAAGAATTGTGGCATTGCTTCAAGTCCAAGAAAGAAGCATTCCCTTTTTTCTACAAGGCTTATTCTCACCTTCGAATGAAAAACTGGGTAGTGAGGTCAGGGGCTCAGTATGGTGTAGACCTCATTGTCTATCGCCATCATCCGGCTCGGGTCCATTCCGAGTATGGTGTACTTGTTCTATCACATGAGAATGTTGACGATGATATAAATGGAAGATTGAGAGTATGGTCTGATGTTCATTGCACAACAAGACTTCTTGGAAGTGTTGCAAAGACCTTATTAGTCTTGTACATTAATAAAAATGGTCACAGTGATGAGTCTCCGTCGTGTTTGGAAAACTATACCATTGAAGAACGTACAATCTCCAGATGGAGTCCAGAACAATGTCGTGAAAGATCTATTTAG 855 0.3883 MSSICKSQLETWIFFGQKGRRIEKGRSAPPPLLFVKKGQMAPRWKGKDAKSKKDAEAEALKEPMSKIISQLHTSLVLSNTCGFLCDNSVHLAVQAEQLDLLDKACFGRPVRSVEKDMYWFQLSLEEAFYLCYSLKCLKINGGSDTGPSNDEELWHCFKSKKEAFPFFYKAYSHLRMKNWVVRSGAQYGVDLIVYRHHPARVHSEYGVLVLSHENVDDDINGRLRVWSDVHCTTRLLGSVAKTLLVLYINKNGHSDESPSCLENYTIEERTISRWSPEQCRERSI 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02139 284 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2-1-LIKE 40 283 - -
Car03g02139 284 Pfam tRNA intron endonuclease, N-terminal domain 83 147 IPR006678 GO:0000213|GO:0006388
Car03g02139 284 Pfam tRNA intron endonuclease, catalytic C-terminal domain 167 252 IPR006677 GO:0000213|GO:0006388
Car03g02139 284 Gene3D - 163 261 IPR011856 GO:0003676
Car03g02139 284 SUPERFAMILY tRNA-intron endonuclease catalytic domain-like 164 252 IPR036167 GO:0006388
Car03g02139 284 PANTHER TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2 40 283 IPR006676 GO:0000213|GO:0006388
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02139 K15322 - gmx:100810335 381.719