Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02118 ATGGGTGAAGCACCAGCATTCCTTGTTGATGACCTTCAAGATGGGCCTCTTAGTGGCCTTGAATTAAATAACGGAGCTTGCAAAACGACTACTATGGTTGGTGATAAAACGTATGTCATAGTTGGAGCTGGTGATGGAACTTTGTCCATTGACGTTCAAATTTTTGACCGTAGTCTTGGAGAATGGGTTCACCCAACTGTGCTGGGAAACAAACCCTCTTCATGCAAAGGCCACTCGGCTGTGCTTTTTGAAAACCGGATACTAGTTCTCAAGAAGGGTTCTAAACCAGATGATCAGATATGGTTCCTAGAGGTGGACACTCAATATGTTAGGCAACAGCGGAAAAAATTGGGGACTGAGGTTGTTGCATGGAGTAAGGGTGTGATAGGCAATGTTGAGAGACCTGTTGTTATCAGTGGTCCTTCTGGAGTCGGTAAAGGAACACTAATATCGATGCTCATGAAGGAATTCCCATCGATGTTTGGCTTTTCTGTGAGCCACACCACCCGTGCTCCAAGAAATATGGAGAAAGATGGGGTCCATTACCATTTTACCGATAAGAGTGTGATGGAGAAAGAGATCAAGAATGGAAAGTTTCTCGAATTTGCTTCTGTCCATGGTAATTTGTACGGGACGAGTGTTGAAGCTGTGGAAGTTGTAGCAGATTCAGGAAAAAGATGTATTCTTGATATTGATGTTCAAGGAGCAAGATCTGTGAGGGCTAGTTCTCTTGAAGCCATTTTCATCTTTATCAGTCCACCGTCAATGGAAGAGCTGGAGAAGCGCCTTCGTGACAGAGGAACTGAGGCAGAGGAACAGATCCTTAAGCGACTGCGTAATGCCGAGGCTGAGATTGAGCAGGGAAAGTCTTCTAATGTATTTGATTTCACCTTATACAATGACAATCTTGAGGAGTGTTATGAGAGACTTAAGAAATTATTGGGACTTGATGGTTTTGTCACTCCACAAAAATCAGCTGCACCTAGAGAGATTAATCTGCCAATGGATCATTCGGTGTCGAAAGTTGATGACAAAATCATCATAAACTGCATTTCTTCGGAACTAGAGAATGAATCAAAGAATTTGATCATGTTGGATGTTTCCTCAATAAAAGGAGGTGCACCTGGAAGGACAAGAGGGCTCGATTTTCAAGTCATTGATTAG 1164 0.4287 MGEAPAFLVDDLQDGPLSGLELNNGACKTTTMVGDKTYVIVGAGDGTLSIDVQIFDRSLGEWVHPTVLGNKPSSCKGHSAVLFENRILVLKKGSKPDDQIWFLEVDTQYVRQQRKKLGTEVVAWSKGVIGNVERPVVISGPSGVGKGTLISMLMKEFPSMFGFSVSHTTRAPRNMEKDGVHYHFTDKSVMEKEIKNGKFLEFASVHGNLYGTSVEAVEVVADSGKRCILDIDVQGARSVRASSLEAIFIFISPPSMEELEKRLRDRGTEAEEQILKRLRNAEAEIEQGKSSNVFDFTLYNDNLEECYERLKKLLGLDGFVTPQKSAAPREINLPMDHSVSKVDDKIIINCISSELENESKNLIMLDVSSIKGGAPGRTRGLDFQVID 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02118 387 SUPERFAMILY Galactose oxidase, central domain 31 111 IPR011043 -
Car03g02118 387 Gene3D - 135 317 IPR027417 -
Car03g02118 387 ProSiteProfiles Guanylate kinase-like domain profile. 133 315 IPR008144 -
Car03g02118 387 Coils Coil 271 291 - -
Car03g02118 387 ProSitePatterns Guanylate kinase-like signature. 168 185 IPR020590 -
Car03g02118 387 SMART gk_7 132 318 IPR008145 -
Car03g02118 387 Hamap Guanylate kinase [gmk]. 131 318 IPR017665 GO:0004385|GO:0006163
Car03g02118 387 PANTHER TIGHT JUNCTION PROTEIN ZO-3-RELATED 1 318 - -
Car03g02118 387 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 134 314 IPR027417 -
Car03g02118 387 TIGRFAM guanyl_kin: guanylate kinase 135 314 IPR017665 GO:0004385|GO:0006163
Car03g02118 387 Gene3D - 20 134 IPR015915 GO:0005515
Car03g02118 387 Pfam Guanylate kinase 133 314 IPR008145 -
Car03g02118 387 PANTHER GUANYLATE KINASE-RELATED 1 318 - -
Car03g02118 387 CDD GMPK 135 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02118 Car-Chr3 67428830 67432135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02118 K00942 - gmx:100808931 646.351