Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02117 ATGGCGGGAACGGGAAATGATCCGCAGAAACAACTCATAAGCATCATCCGCAATTTCGCTACCGAGAGATCTCAAGGAGAACGAAGAGTAGTTGCACTTCGGAAGCAAATCGAAACGCTTATATCAGAGTTGAGCGAGGTCAATGCGGAGCTTGAGAAATCTAAGCGCTGCAAAGAACTTGTTGAACAGGAACTTAAAGGCTTTGAACTTCATTTGTTTTTGAGTGAAGCTTCAGTTCAAACGCTAGAGGCTAGGGTTTCTTTAACTCAGGTTGACATGTCTGTTGTGGAATCTTATTTGGAAACACTAAAGGATGAAGGAGTGATTTCACGTGAGCAATTCATTCACCAAATGCTTGACCTGAATGCCAAAATAAGGAAATTTCAAGAGAGCATCGTTACTTGTGACACTGATGCAGTAGAATATGCAGCTTGTAGAGGTTCAATAGACTTTTACTTTGTTTCAGATCCAGCAGAAGTAATTATGAAAGAAAATGATGCTGATGTTGCTCTAGGGGCTCTTGAAAGTAGCCTTTTGGAGATAACATCTCAAACAACTAAAGAGGAGGCTGAATTCCAAGGCCAACAGAAAATTTATGAGAACGTCCAGCGTGAATTGATTGACCGTGAAAGAAAGCTAACAGATCCAAGTGTCCTAGATGTCATCTGGACAATTTGGAGTCTCTCAGTGCGGTTCTGCAGGCAAATGAAGAAGACTGATGTTTCCCATGTAACAGAGGAAAACCAAGAAGATGAACAAATAACTGAAATCAGAGAAATCCATGCCTTAACACCACAACCCACCAACCATGGCCACAACCACCGTTCATCTTCTGTGTCCATAACCAGCACCACAGAAAGTGATCAGAACTTCACAACCATGAGCAGAGAATTCACTGCTCTTGTTCTAGCAGGACAAACCATTGatcacaacaacataagcactccacatgaacatgaagctgttaacaacaacaacaacaacaacaacTTGGGGAGAATTGGAGAAGATGATATGATGGTAGAAACAAACCCTTTAGCGATTGTTGCTGATAACAACCCTTTAGAGTTAAACCCTGTTGCATCTCCTACTAGAAGAAGAACTATGAATGATGGTGTTGGTGCACGTGTGAGTGAAGAACAACACGTGTCGGTTCAGAGGGTGAAGAAGGAAGAAGTTGATACAAAGATATCAGCTTGGCAGAATGCTAAGGTTGCTAAGATTAATAACAGGTTTAAGAGGGAAGATGCTGTGATCAATGGTTGGGAGAATGAACAGGTTCAGAAAGCTACTTCTTGGATGAAAAAAGTTGAGAGGAAGCTGGAAGAGAAAAGAGCAAAAGCGTTGGAGAAAATGCAAAACAAAGTAGCAAAAGCAcatagaaaagcagaggagagaagagcatcagcagagGCAAAAAGGGGAACTAAAGTAGCCAGAGTTCTTGAGATTGCTGGCCTTATGAGAGCAGTTGGAAGACCTCCTTCCAAAAAATCTTTCTTCTAA 1506 0.3884 MAGTGNDPQKQLISIIRNFATERSQGERRVVALRKQIETLISELSEVNAELEKSKRCKELVEQELKGFELHLFLSEASVQTLEARVSLTQVDMSVVESYLETLKDEGVISREQFIHQMLDLNAKIRKFQESIVTCDTDAVEYAACRGSIDFYFVSDPAEVIMKENDADVALGALESSLLEITSQTTKEEAEFQGQQKIYENVQRELIDRERKLTDPSVLDVIWTIWSLSVRFCRQMKKTDVSHVTEENQEDEQITEIREIHALTPQPTNHGHNHRSSSVSITSTTESDQNFTTMSREFTALVLAGQTIDHNNISTPHEHEAVNNNNNNNNLGRIGEDDMMVETNPLAIVADNNPLELNPVASPTRRRTMNDGVGARVSEEQHVSVQRVKKEEVDTKISAWQNAKVAKINNRFKREDAVINGWENEQVQKATSWMKKVERKLEEKRAKALEKMQNKVAKAHRKAEERRASAEAKRGTKVARVLEIAGLMRAVGRPPSKKSFF 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02117 501 PANTHER OS02G0116800 PROTEIN 236 500 - -
Car03g02117 501 PANTHER CARBOXY-TERMINAL REGION REMORIN 236 500 - -
Car03g02117 501 Pfam Remorin, C-terminal region 392 497 IPR005516 -
Car03g02117 501 Coils Coil 434 469 - -
Car03g02117 501 Coils Coil 30 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02117 Car-Chr3 67412188 67422179 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02117 - - aprc:113862352 296.589
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02117 03 67412188 67422179 Car04g02233 04 31993761 31996441 PCT