Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02096 ATGGCCAGCACAGTATCAAACTGCATCCAACTCGGCGGCGGCGCCGAGTCAACTCGCCCGCCAAAATCCACACTAACACGCAAGAAGAAAACCAACGAGTTAGCATTCAAGGAGACGAAGGACGGCTTCGTTGACTACGACAGAGGTCAGCACGAAGTATCCACGAGAATCACCGGCCTCCGCAAGGATGACATCCCCGCCCACTACCGCCTCCGAGTCGCCGGCAACCGCTTTCAAAAGGACTGGACAGTGTCGGAGGTCACCGACTCGATTCTCTCCCTCACCCTCCGTGATGACGTCGAAGGTCTACTCAACCGCTGGATAGGCCGCTTCGCACGCAAGAATTTCCCTTTCCTCATTAGGGAGTTGACACAGAGAGGTTCAATTGAACACTGTAACTTAGTTTTCAGCTGGATGAAGAACCAGAAGAATTATTGTGCTAGAACAGATATATACAACATGATGATTAGGTTGCAGGCTAGGCATAATAGAACGGACCAGGCACGTGGGTTGTTTTTCGAGATGCAAAAATGGAGGTGCAAGCCTGATGCTGAGACTTACAGTGCTCTTATTAATGCACATGGTCGAGCTGGACAATGGCGTTGGGCTATGAATATCATGGAAGACATGTTGCGTGCAGCTATTCCACCAAGTCGGTCAACCTACAACAACTTGATTAATGCCTGTGGATCTAGTGGAAATTGGAAAGAAGCACTTAATGTTTGCAAGAAAATGACTGACAATGGAGTTGGACCTGATCTTGTCACTCACAATATTATGTTATCTGCATTTAAAAGTGGACATCAGTATTCAAAAGCTTTGTCGTATTTTGAATTAATGAAGGGAACTCACATTCGCCCCGACGCAACCACACTCAATATTATTATTCATTGTCTAGTGAAGCTTCGACAGTATGACAAAGCCATTGATATTTTTAATTCCATGAGGGAAAAGAAGTCGGAATGTCATCCTGATGTTGTAACATTCACTAGTATCATTCATTTGTATTCTGTGTCTGGGCAAATTGAAAATTGTGAGGCTGCATTCAGTATGATGCTTGCAGAAGGGCTGAAACCAAATATAGTATCATACAATGCATTACTAGGTGCATATGCTGCTCGTGGGATGGAAAATGAGGCACTACAAGTTTTTAATAAGATAAAGCAAAATGGTCTCCGCCCAGATATTGTATCTTATACATCTCTGCTTAATGCATATGGAAGATCACGAAAGCCCCAAAAAGCAAGGGAAATATTCATAATGATGAAGAGAAACAACTTGAAGCCAAACATTGTCAGTTACAATGCACTGATTGATGCCTATGGATCCAATGGTTTGCTTGAAGATGCAATTGAAATCTTGCGGGAAATGGAACAGGATAGGATTCATCCGAATGTTGTCTCAATATGTACGCTCTTGGCTGCCTGTGGGCGGTGCTATCAGAAGGTGAAGATCGATACTGTGTTATCAGCAGCTGAGATGCGAGGCATTAAGTTGAACACAGTTGCATATAATTCAGCTATAGGAAGCTATATTAATGTGGGGGAATATGACAAAGCCATAGATTTGTATAACTCTATGAGGAAGAAAAATATAAAATCTGATTCTGTTACTTACACTGTCTTGATAAGTGGTTGTTGTAAGATGTCCAAATATGGGGAAGCCCTATCTTTTATGGAAGAAATGATGCATCTAAAACTTTCTATGTCCAAAGAGGTCTACTCATCTGTCATATGTGCCTATAGCAAACAGGGTCAAATCACAGAAGCAGAGTCTACATTCAATTTGATGAAATCATGTGGTTGCAATCCAGATGTTGTTACATATACTGCAATGCTTGATGCCTACAATGCAGCTGAGAAGTGGGAGAAAGCATATGCTCTCTTTGAAGAAATGGAAGCAAATGAGGTCAAGCTAGATACCATCGCATGTGCAGCTGTAATGAGAGCTTTTAACAAAGGTGGCCAACCAGGAATGGTCCTTAGTCTTGCACAAAGTATGAGAGAAAAAGAGATTCCTTTAAGTGATACCATATTTTTTGAAATGGTATCTGCATGTAGCTTATTACATGATTGGAAGACAGCTGTTGATGTGATCAAGTACATGGAGCCTTCACTTCCTGTAATTTCATCTGGATGTTTGAATCTGTTCCTGCATTCATTAGGAAAAAGTGGAAAGATTGAAACAATGTTGAAGCTATTCTTCAAAATGCTGGCATCAGGTGCTGATGTTAACTTCAATACTTATTCTATTTTATTGAAAAACCTTTTATCATCTGGAAATTGGAGGAAGTATTTAGAGGTACTACAGTGGATGAAGGATGCAGGAATTAATCCCTCGAATGAAATGTACCGTGATATATCCTCCTTTTCACAAAAATGCTGTGGGGCTGAAAATGCTGCTGTCATAAAAGAAAGGCTTGAATCCTTGAAGAGAAAAGCTGGGGATGAAATTTCTGCAAGCCAATCTTGCGAATCTCACGTTCTTATAAATTTATTTGATCATCCTCTATTCCGTAGGGCGAATCCCAAGAGCACCGGAGATGGAACTCTAAGAAAAAAAACATTCCACTAA 2574 0.4134 MASTVSNCIQLGGGAESTRPPKSTLTRKKKTNELAFKETKDGFVDYDRGQHEVSTRITGLRKDDIPAHYRLRVAGNRFQKDWTVSEVTDSILSLTLRDDVEGLLNRWIGRFARKNFPFLIRELTQRGSIEHCNLVFSWMKNQKNYCARTDIYNMMIRLQARHNRTDQARGLFFEMQKWRCKPDAETYSALINAHGRAGQWRWAMNIMEDMLRAAIPPSRSTYNNLINACGSSGNWKEALNVCKKMTDNGVGPDLVTHNIMLSAFKSGHQYSKALSYFELMKGTHIRPDATTLNIIIHCLVKLRQYDKAIDIFNSMREKKSECHPDVVTFTSIIHLYSVSGQIENCEAAFSMMLAEGLKPNIVSYNALLGAYAARGMENEALQVFNKIKQNGLRPDIVSYTSLLNAYGRSRKPQKAREIFIMMKRNNLKPNIVSYNALIDAYGSNGLLEDAIEILREMEQDRIHPNVVSICTLLAACGRCYQKVKIDTVLSAAEMRGIKLNTVAYNSAIGSYINVGEYDKAIDLYNSMRKKNIKSDSVTYTVLISGCCKMSKYGEALSFMEEMMHLKLSMSKEVYSSVICAYSKQGQITEAESTFNLMKSCGCNPDVVTYTAMLDAYNAAEKWEKAYALFEEMEANEVKLDTIACAAVMRAFNKGGQPGMVLSLAQSMREKEIPLSDTIFFEMVSACSLLHDWKTAVDVIKYMEPSLPVISSGCLNLFLHSLGKSGKIETMLKLFFKMLASGADVNFNTYSILLKNLLSSGNWRKYLEVLQWMKDAGINPSNEMYRDISSFSQKCCGAENAAVIKERLESLKRKAGDEISASQSCESHVLINLFDHPLFRRANPKSTGDGTLRKKTFH 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02096 857 Pfam PPR repeat family 573 616 IPR002885 -
Car03g02096 857 Pfam PPR repeat family 500 548 IPR002885 -
Car03g02096 857 Pfam PPR repeat family 151 194 IPR002885 -
Car03g02096 857 Pfam PPR repeat family 219 264 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 253 287 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 183 217 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 502 535 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 151 184 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 362 396 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 327 361 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 397 431 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 221 253 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 291 320 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 607 640 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 537 569 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 748 780 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 573 606 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 186 218 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 255 289 IPR002885 -
Car03g02096 857 TIGRFAM PPR: pentatricopeptide repeat domain 432 466 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 148 182 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 395 429 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 360 394 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 535 569 IPR002885 -
Car03g02096 857 PANTHER RESPIRATORY COMPLEX I CHAPERONE (CIA84), PUTATIVE (AFU_ORTHOLOGUE AFUA_2G06020)-RELATED 23 788 - -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 218 252 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 325 359 IPR002885 -
Car03g02096 857 MobiDBLite consensus disorder prediction 1 21 - -
Car03g02096 857 MobiDBLite consensus disorder prediction 1 27 - -
Car03g02096 857 Pfam Pentatricopeptide repeat domain 383 444 IPR002885 -
Car03g02096 857 Pfam Pentatricopeptide repeat domain 322 372 IPR002885 -
Car03g02096 857 Pfam Pentatricopeptide repeat domain 733 781 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 605 639 IPR002885 -
Car03g02096 857 Gene3D Tetratricopeptide repeat domain 653 834 IPR011990 GO:0005515
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 745 779 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 570 604 IPR002885 -
Car03g02096 857 SUPERFAMILY TPR-like 181 354 IPR011990 GO:0005515
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 430 464 IPR002885 -
Car03g02096 857 Pfam PPR repeat 291 318 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 288 322 IPR002885 -
Car03g02096 857 ProSiteProfiles Pentatricopeptide (PPR) repeat profile. 500 534 IPR002885 -
Car03g02096 857 PANTHER OS07G0213300 PROTEIN 23 788 - -
Car03g02096 857 Gene3D Tetratricopeptide repeat domain 566 638 IPR011990 GO:0005515
Car03g02096 857 Gene3D Tetratricopeptide repeat domain 461 565 IPR011990 GO:0005515
Car03g02096 857 Gene3D Tetratricopeptide repeat domain 247 317 IPR011990 GO:0005515
Car03g02096 857 Gene3D Tetratricopeptide repeat domain 388 460 IPR011990 GO:0005515
Car03g02096 857 Gene3D Tetratricopeptide repeat domain 84 246 IPR011990 GO:0005515
Car03g02096 857 Gene3D Tetratricopeptide repeat domain 318 387 IPR011990 GO:0005515
Car03g02096 857 SUPERFAMILY TPR-like 288 630 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02096 301 833 Glycosyltransferase AT1G05670 22.015 1.08e-31 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02096 - - gmx:100814643 1438.71