Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02094 ATGGGAACTTCTTGGAGGCAGTTGAAGGTTATGCTCAGAAAAAACTGCCTCCTCAAAATTCGTCACCCTTTCGTTACTGCTGCTGAGATTTTGCTTCCTGCGATTGTGTTGTTGCTATTAGCAGCTGTAAGGACACGTGTGGATACACAAATTCATCCAGCTCAATCGTTAGTTTTCTATTCATCAATTTCTATTGGGAAAGGTATATCCCCTAACTTCCAACAAGTGATAGAATCCTTGTTGGATAAGAAAGAGCATTTAGCTTTTGCACCAGATACCAAAGAAACAAGGATGATGATAGACGTGGTGTCAATCAAATTTCCACTTTTGAAGCTTGTTAGTATTGTATACAAAGACGAGGTAGAGTTGGAAACCTACATCCGGTCAGATGCTTATGGTATCTGTCATGACATAAGGAATTGTTCAAATCCCAAAATTAAAGGAGCAGTTGTATTTTACGAACAAGGTCCTCAGTCATTTGACTATAGCATACGCCTCAATCATACATGGGCTTTCTCTGGTTTTCCAGATGTTACAACAATAATGGATACAAATGGTCCTTTTCTTAATGACTTGGAACTTGGTGTTAGTGCTGTACCAACAATGCAATACAGCTTCAGTGGGTTTTTGACACTCCAGCAAATGGTTGACTCATTCATAATATTAATAGCTCAACAGCCTGAATTAAATTCAGTTGCTGACACAGTAAAGCTTCCTCTTCTAGGATTTCATGACACCGATTTCTCGTTAAAAGTTCCATGGACTCAGTTTAATCCTACTAATATACGAATAGCTCCATTTCCCACTCGAGAGTACACTGATGACCAGTTCCAGGCAATTGTAAAGGAAGTCATGGGAATACTGTATTTATTGGGGTTTCTCTATCCAGTTTCTCACCTAATAAGTTATTCTGTGCATGAGAAGGAACAAAAGATCAAAGAAGGACTGTATATGATGGGCTTGAAAGATGGCATATTTCATCTCTCTTGGTTTATCACATATGCTTTGCAGTTTGCAATTTCTTCTGCGGTCATTACAGCTTGCACTTTGGATAATATATTCAAGTACAGTGATAAGACACTGGTGTTTGCATACTTCTTCATTTTTGGGCTTAGTGCAATCATGCTATCATTTTTCATATCAACATTTTTCAAAAGGGCCAAAACAGCTGTAGCTGTTGGAACTCTGTCATTTCTTGGTGCCTTTTTCCCTTACTACACTGTCAATGATGCGGGAGTCTCTATGGTCTTGAAGGTGCTTGCTTCTCTGCTTTCACCTACGGCATTTGCGCTGGGTTCTGTCAACTTTGCTGATTATGAGCGTGCTCATGTCGGACTTCGTTGGAGCAACATATGGCGGGTGAGTTTCTGCAGTAGGGCCCTTGCCTTTACTATTCTATCCAAACATTCTAAGACATTTAGCTTGCAGGAGTCCTCTGGAGTAAACTTTTCCATATGTCTTCTGATGATGATACTTGATACACTGCTCTACTGTGCAATTGGACTGTATTTTGATAAGGTTCTTCCAAGGGAGTATGGATTGCGATATCCGTGGAACTTTATTTTCCGAAAGGACTTCTGGAGAGAGAAAAAAATTGTAAATACTTGTTCCTCCAGTTTTAAAGTTAGAATTTCTGGTAAGAATTCTGAGTCAGAAGGGAACCCTTTAGGGCAAGATACTTTCAAACCTGCCATAGAAGCAATAAGCTTAGACATGAAACAACAGGAGCTTGATGGCAGGTGCATTCAAATCAGGAATTTGCATAAAGTGTATGGTACTAAAAAAGGAGATTGCTGTGCTGTAAACTCATTACAGCTGACACTGTATGAAAATCAGATTCTTGCTCTTCTAGGGCATAATGGAGCTGGGAAAAGCACGACAATATCAATGCTTGTTGGTCTTCTTCCTCCTACTTCTGGGGATGCTTTGATTTTTGGAAAGAACATTGTTTCCGATATTGATGAGATACGGAAGGTTTTAGGTGTCTGCCCACAACATGATATACTATTTCCTGAATTGACTGTGAGAGAGCATTTAGAACTATTTGCCATATTAAAGGGTGTGCAGCAAGACACACTGGAGGACGTTATTATTAATATGGCTGATGAGGTGGGCCTGGCTGATAAAATCAACACAGTTGTGAAATCTCTTTCTGGTGGCATGAAAAGGAAATTGTCTCTTGGAATTGCATTGGTCGGAAACAGTAAGGTAGGACACATAGACAACACTGCTTTTTGTTTTCATATGTTGAGCAGGATTGGAAACTTTAGACTTATTTGGCAGGTTATAATTCTTGATGAGCCTACAAGTGGAATGGATCCATACTCAATGCGCTTGACTTGGCAGTTAATAAAAAAAATTAAGAAGGGCAGGATAATTTTGCTAACAACACATTCTATGGATGAAGCAGATGAACTAGGTGACCGGATAGCTATCATGGCCAATGGTTCTCTGAAATGCTGTGGAAGCTCCCTTTTCCTGAAGCATCACTATGGAGTTGGTTACACTCTAACTCTTGTAAAGTCCGCTCCTACTGCTTCTATAGCTGGTGATATAGTATACCGGTATGTTCCAACGGCAACCTGTATAAGCGAGGTTGGAACTGAGATTTCCTTCAGACTTCCAATGGCATCCTCTTCAACCTTTGAGAGGATGTTCAGGGAAATTGAAGGTTGCATGAAAAAGCCGGTTTCAAACATGGAAATAAGTGGCAGTTGTGAAAAAGACAGTCACGGTATTGAAAGCTATGGTATATCTGTAACAACCCTAGAGGAGGTATTCTTGAGAGTTGCCGGTTGTGACTATGATGAAGTTGAGTGCTTTGAAGAAAATAACAATTCCCTTATATCAGATTATGTGGTTTCTCTTCCTTCTAATGATTGTCCATCCACTAAAACGTGTTGTTTGAATGTTTTTGGAAATTATAAGAATATTCTTGGCTTCATGTCTACCATGGTGGGGAGAGCTTGTGATTTAATTCTTGCTACAGTTATTAGTTTTGTTAACTTTGTAGGCATGCAATGTTGTAGCTGTTGTCTCATTACTAGGTCCACTTTTTGGCAACATTCTAAAGCTTTAGTTATTAAGAGGGCGATATCTGCTCGGAGGGATCACAAAACAATTATTTTCCAGCTAATGATTCCCGCCCTCTTCTTGTTTATTGGTCTTCTATTTCTGGAGCTCAAGCCACATCCTGATCAGATTTCACTGACTCTTTCAACTTCTTATTTCAATCCTCTATTGAGCGGCGGAGGTGGGGGTGGTCCAATTCCGTTTAATCTATCCTTTCCAATTGCTGAAAAGGTTTTGCAAAATGTCAAAGGTGGTTGGATACAAACGTGCAACCCAAGCTCATACAAATTCCCCAATTCAGAAAAGGCATTAGCTGATGCAGTGGAAGCAGCAGGGCCAACTCTGGGACCTTCTCTACTTTCAATGAGTGAATATTTGATGTCTAGCTTTAATGAGTCTTACCAATCTAGGTATGGGGCAATTGTGATGGATGATCAGAATACCGATGGAAGCTTAGGCTACACTGTTTTACACAACTTTTCTTGTCAACATGCTGCTCCCACCTTTATCAATTTGATGAATTCTGCAATTCTTAGGCTTACTACTCGTAACATCAATGCGACAATTCAGACACGCAACTACCCTCTACCAATGACACGAAGCCAGCACTTACAACGTCATGACCTGGATGCTTTCTCTGCTGCTATAATTGTCAATATAGCCTTCTCTTTCATACCTGCCTCGTTTGCTGTTTCAATTGTTAAGGAACGTGAAGTGAAAGCTAAGCACCAACAACTAATCAGTGGGGTTTCCATCCTTTCATATTGGGCCTCTACATTTATTTGGGACTTTGTGAGCTTCTTGTTTCCAGCCTCGTTTGCCATAATTCTCTTCTACATCTTTGGTCTTGATCAGTTTGTTGGAGGAGTTTCTTTGTTACCAACGATCATCATGCTTTTGGAGTATGGACTTGCAATCGCATCGTCAACTTATTGCCTTACATTTTTCTTTTTTGACCATACTGTGGCTCAGAACGTGGTTCTCCTGGTGCACTTTTTTTCTGGATTGATACTAATGGTTATCTCATTTGTTATGGGACTTATTCCATCCACAAAAAGTGCTAATTATTTTCTTAAGAACATTTTCAGAATATCTCCTGGATTTTGTTTTGCTGACGGCCTTGCTTCGTTAGCTCTTTTACGGCAAGGAATGAAAGATAAAACAAGTGATGGAGTGTATGACTGGAATGTTACGGGTGCCTCCATTTGTTATCTTGGTGTTGAGAGCTTGATTTATTTTTTATTGACGCTCGGGCTTGAATTTTTTCCTTCTCTCAAATTGACTTCATTCATGATCAAGAAGTGGTGGGGGAAAATTAATATCTTCCCAAATAATATTTCTTATCTGGAACCTCTATTAGAACCTTCCCCAGAAACTTTCGTTACGGACGAAGACGTAGATGTGAAAACAGAAAGAAATAGAGTACTTTCAGGTTCTGTTGACAATGCCATTATCTACTTGCGCAATCTTCGTAAGGTGTATTCTGAAGACAAGAATCATGGGAAAAAGGTTGCAGTAGATTCATTAACCTTCTCTGTTCAGGAAGGAGAATGTTTTGGCTTCTTAGGAACAAATGGAGCTGGAAAGACCACAACAATTTCTATGCTATGCGGGGAGGAATCTCCTTCTGATGGGACTGCTTTTATTTTTGGCAAAGATATATGTTCCCATCCCAAGGCTGCTCGTAAATATATTGGATATTGTCCACAATTTGATGCTCTGTTGGAATTCTTAACTGTCAAAGAGCATCTGGAGCTCTATGCTAGAATAAAAAGTGTTCCAGATTACACGATAAACAATGTTGTTATGGAAAAGTTGGTGGAGTTTGACTTATTGAAGCATGCTAATAAACCATCATTTTCACTTAGTGGAGGGAATAAAAGGAAACTCTCTGTTGCAATTGCAATGATTGGAGATCCTCCTATAGTCATTCTTGATGAGCCATCCACAGGTAGAATGGATCCCATTGCCAAAAGGTTCATGTGGGACGTAATATCTAGAATCTCAACTAGACGAGGAAAGACTGCAGTTATTCTTACTACCCATAGCATGAATGAAGCTCAAGCCTTATGTACCAGAATAGGGATTATGGTTGGTGGGCAACTAAGATGCATTGGAAGTCCACAGCATCTAAAAACAAGATTTGGCAATCATCTAGAACTAGAGGTAAAACCTACTGAAGTGAGCTCTGTGGACTTGAAAACACTGTGCCAAGCAATTCAGGAAATACTTTTTGATGTCCCTTCTCAACCTAGAAGCTTACTTAATGACCTTGAAATTTGCATTGGGGGTGCTGACTCTATCACCTCGGGAAATACCTCCGTTGCAGAGATTAGCCTGACACCCGAAATGATAGGCTTAATTGGACGCTGGCTTGGCAACGAAGAAAGAGTGAAGACACTAATATGCAGTACACCTGACTACGATGGAGCCTCTCAGGAACAGTTATCAGAACAATTATTTCGAGATGGTGGTATTCCATTGCCAGTATTTTCTGAGTGGTGGTTGTCCAAACAAAAATTCTCCGAAATTGACTCATTTATTCTCTCTTCATTTCGTGGAGCAAGATGCCAGGGGCACAATGGTTTAAGCATCAGATACCAGTTACCATATGATGAAGAGTTTTCCCTGGCGGATGTTTTTGGACTTCTAGAAGGAAACAGAGAAAGGTTAGGGATTGCCGAGTACAGCATCAGCCAATCAACTCTGGAGACAATATTTAACCATTTTGCAGCTAATTATTCATGA 5820 0.3997 MGTSWRQLKVMLRKNCLLKIRHPFVTAAEILLPAIVLLLLAAVRTRVDTQIHPAQSLVFYSSISIGKGISPNFQQVIESLLDKKEHLAFAPDTKETRMMIDVVSIKFPLLKLVSIVYKDEVELETYIRSDAYGICHDIRNCSNPKIKGAVVFYEQGPQSFDYSIRLNHTWAFSGFPDVTTIMDTNGPFLNDLELGVSAVPTMQYSFSGFLTLQQMVDSFIILIAQQPELNSVADTVKLPLLGFHDTDFSLKVPWTQFNPTNIRIAPFPTREYTDDQFQAIVKEVMGILYLLGFLYPVSHLISYSVHEKEQKIKEGLYMMGLKDGIFHLSWFITYALQFAISSAVITACTLDNIFKYSDKTLVFAYFFIFGLSAIMLSFFISTFFKRAKTAVAVGTLSFLGAFFPYYTVNDAGVSMVLKVLASLLSPTAFALGSVNFADYERAHVGLRWSNIWRVSFCSRALAFTILSKHSKTFSLQESSGVNFSICLLMMILDTLLYCAIGLYFDKVLPREYGLRYPWNFIFRKDFWREKKIVNTCSSSFKVRISGKNSESEGNPLGQDTFKPAIEAISLDMKQQELDGRCIQIRNLHKVYGTKKGDCCAVNSLQLTLYENQILALLGHNGAGKSTTISMLVGLLPPTSGDALIFGKNIVSDIDEIRKVLGVCPQHDILFPELTVREHLELFAILKGVQQDTLEDVIINMADEVGLADKINTVVKSLSGGMKRKLSLGIALVGNSKVGHIDNTAFCFHMLSRIGNFRLIWQVIILDEPTSGMDPYSMRLTWQLIKKIKKGRIILLTTHSMDEADELGDRIAIMANGSLKCCGSSLFLKHHYGVGYTLTLVKSAPTASIAGDIVYRYVPTATCISEVGTEISFRLPMASSSTFERMFREIEGCMKKPVSNMEISGSCEKDSHGIESYGISVTTLEEVFLRVAGCDYDEVECFEENNNSLISDYVVSLPSNDCPSTKTCCLNVFGNYKNILGFMSTMVGRACDLILATVISFVNFVGMQCCSCCLITRSTFWQHSKALVIKRAISARRDHKTIIFQLMIPALFLFIGLLFLELKPHPDQISLTLSTSYFNPLLSGGGGGGPIPFNLSFPIAEKVLQNVKGGWIQTCNPSSYKFPNSEKALADAVEAAGPTLGPSLLSMSEYLMSSFNESYQSRYGAIVMDDQNTDGSLGYTVLHNFSCQHAAPTFINLMNSAILRLTTRNINATIQTRNYPLPMTRSQHLQRHDLDAFSAAIIVNIAFSFIPASFAVSIVKEREVKAKHQQLISGVSILSYWASTFIWDFVSFLFPASFAIILFYIFGLDQFVGGVSLLPTIIMLLEYGLAIASSTYCLTFFFFDHTVAQNVVLLVHFFSGLILMVISFVMGLIPSTKSANYFLKNIFRISPGFCFADGLASLALLRQGMKDKTSDGVYDWNVTGASICYLGVESLIYFLLTLGLEFFPSLKLTSFMIKKWWGKINIFPNNISYLEPLLEPSPETFVTDEDVDVKTERNRVLSGSVDNAIIYLRNLRKVYSEDKNHGKKVAVDSLTFSVQEGECFGFLGTNGAGKTTTISMLCGEESPSDGTAFIFGKDICSHPKAARKYIGYCPQFDALLEFLTVKEHLELYARIKSVPDYTINNVVMEKLVEFDLLKHANKPSFSLSGGNKRKLSVAIAMIGDPPIVILDEPSTGRMDPIAKRFMWDVISRISTRRGKTAVILTTHSMNEAQALCTRIGIMVGGQLRCIGSPQHLKTRFGNHLELEVKPTEVSSVDLKTLCQAIQEILFDVPSQPRSLLNDLEICIGGADSITSGNTSVAEISLTPEMIGLIGRWLGNEERVKTLICSTPDYDGASQEQLSEQLFRDGGIPLPVFSEWWLSKQKFSEIDSFILSSFRGARCQGHNGLSIRYQLPYDEEFSLADVFGLLEGNRERLGIAEYSISQSTLETIFNHFAANYS 1939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02094 1939 Pfam ABC transporter 1531 1673 IPR003439 GO:0005524
Car03g02094 1939 Pfam ABC transporter 602 742 IPR003439 GO:0005524
Car03g02094 1939 Pfam ABC-2 family transporter protein 232 502 - -
Car03g02094 1939 Pfam ABC-2 family transporter protein 1039 1441 - -
Car03g02094 1939 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 1367 1931 IPR026082 GO:0016021|GO:0055085|GO:0140359
Car03g02094 1939 PANTHER ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA 5 1365 IPR026082 GO:0016021|GO:0055085|GO:0140359
Car03g02094 1939 Gene3D - 1500 1752 IPR027417 -
Car03g02094 1939 Gene3D - 569 843 IPR027417 -
Car03g02094 1939 CDD ABC_subfamily_A 1509 1736 - -
Car03g02094 1939 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1509 1748 IPR003439 GO:0005524
Car03g02094 1939 ProSitePatterns ABC transporters family signature. 717 731 IPR017871 GO:0005524
Car03g02094 1939 ProSitePatterns ABC transporters family signature. 1646 1660 IPR017871 GO:0005524
Car03g02094 1939 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 1367 1931 - -
Car03g02094 1939 PANTHER ATP-BINDING CASSETTE, SUB-FAMILY A (ABC1), MEMBER 3B 5 1365 - -
Car03g02094 1939 CDD ABC_subfamily_A 582 828 - -
Car03g02094 1939 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 582 840 IPR003439 GO:0005524
Car03g02094 1939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 582 826 IPR027417 -
Car03g02094 1939 SMART AAA_5 610 817 IPR003593 -
Car03g02094 1939 SMART AAA_5 1539 1726 IPR003593 -
Car03g02094 1939 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1504 1742 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02094 Car-Chr3 67153826 67185775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02094 562 843 Calmodulin-binding Proteins AT2G36910 22.945 2.28e-12 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02094 K05643 - gmx:100803263 3252.61