Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02055 ATGAAGTTCATTAACATCAACCCTAAAAATCTCAAACTTAGTCCCAAACGTTTTTTCCGTTCCAAAAAGGAACGCTCTTCAGTATCAAGATCCGACCCGCCATCCTTCGGTTCAACTTCTTCCTCTGATGGATCTAATCACCAACCCGTTACCGGAGGCTCCCAAACTCCTACCAGCGTCCTTCCTGAAATCTCTGGTGACTGGTCCGACGTCACCGTCGACGTTCAGTGGGAGCTTTCTCAGGCTTTCCGGTTAATTGACCGTGACAACGACGGCGTCGTTTCGCGTGAAGAGCTAGAATTAGTTCTCACGCGTCTTGGTGCGCGTGCTGAGGAGATCGCGATTATGCTAACCGAAGTTGATGGAGACGGCCGCGGGTGTATAAGCGTGGAGGCGATTATGAACCGGGTTGGAACCGGTTCGGATCCGAATCCGGAGGAAGAGCTTCGGGAGGCGTTTGAGGTTTTTGATACGGATCGGGATGGGAGAATCTCGGCGGAAGAGTTGTTGAGGGTTTTTAAAGCCATTGGTGATGAGCGGTGCACATTAGAGGAGTGTAGGCGTATGATAGAAGGTGTTGATAAAAACAGAGATGGGTTTGTGTGTTTCGAGGACTTTTCACGTatgatggagttgcaacggtga 645 0.4837 MKFININPKNLKLSPKRFFRSKKERSSVSRSDPPSFGSTSSSDGSNHQPVTGGSQTPTSVLPEISGDWSDVTVDVQWELSQAFRLIDRDNDGVVSREELELVLTRLGARAEEIAIMLTEVDGDGRGCISVEAIMNRVGTGSDPNPEEELREAFEVFDTDRDGRISAEELLRVFKAIGDERCTLEECRRMIEGVDKNRDGFVCFEDFSRMMELQR 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02055 214 MobiDBLite consensus disorder prediction 15 65 - -
Car03g02055 214 CDD EFh 148 210 IPR002048 GO:0005509
Car03g02055 214 ProSitePatterns EF-hand calcium-binding domain. 157 169 IPR018247 -
Car03g02055 214 Gene3D - 60 136 - -
Car03g02055 214 ProSitePatterns EF-hand calcium-binding domain. 194 206 IPR018247 -
Car03g02055 214 ProSiteProfiles EF-hand calcium-binding domain profile. 78 109 IPR002048 GO:0005509
Car03g02055 214 Pfam EF hand 78 105 IPR002048 GO:0005509
Car03g02055 214 CDD EFh 78 174 IPR002048 GO:0005509
Car03g02055 214 SMART efh_1 148 176 IPR002048 GO:0005509
Car03g02055 214 SMART efh_1 78 106 IPR002048 GO:0005509
Car03g02055 214 SMART efh_1 185 213 IPR002048 GO:0005509
Car03g02055 214 MobiDBLite consensus disorder prediction 30 65 - -
Car03g02055 214 Gene3D - 137 214 - -
Car03g02055 214 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 9 212 - -
Car03g02055 214 Pfam EF-hand domain pair 146 210 IPR002048 GO:0005509
Car03g02055 214 ProSiteProfiles EF-hand calcium-binding domain profile. 144 179 IPR002048 GO:0005509
Car03g02055 214 PANTHER CALCIUM-BINDING PROTEIN CML35-RELATED 9 212 - -
Car03g02055 214 ProSiteProfiles EF-hand calcium-binding domain profile. 181 214 IPR002048 GO:0005509
Car03g02055 214 ProSitePatterns EF-hand calcium-binding domain. 87 99 IPR018247 -
Car03g02055 214 SUPERFAMILY EF-hand 67 210 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02055 Car-Chr3 66793420 66794652 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car03g02055 9 214 EF-hand Containing Proteins AT3G10190 52.315 1.62e-61 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02055 K13448 - gmx:100815559 276.174
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02055 03 66793420 66794652 Car03g02055 03 66793420 66794652 ECH