Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02053 ATGGCCGTGATGAGTGGTTTCAGGATTCTAACTTCGAAATCGAGATCGCTGACGTCTCTTAACAAATGGTGGCGGTCGGCGTCGTACTCTTCGACGGCGGTGGCGGCTACTGAGGAACAAGATCATAGCAGTGCGTATTTGAAAGATTATGCTGATTATAGAAGATCGCTTTACGGTCAAATTACTCATAAAGCTCTTCTTGTTGATGCTGTTGGTACTCTTGTTATTCCTTCTCAACCCATGGCTCAGATATATAGGAAAATTGGGGAGAAATATGGTGTGGAGTATTCAGAGGATGAAATATTGCATAGATACAGAAGAGCTTATAGTCAGCCTTGGGGTAAATCTCGTCTCAGATATGTTAATGACGGCAGACCTTTCTGGCAATACATAGTTAGTTGTTCTACTGGCTGTTCCGATTCTCAATACTTTGAAGAACTTTATAACTACTATACAACAGACAAAGCATGGCACCTATGCGACCCTAATGCAGAAGTAGTATTCAGAACTCTTAGAAAATCAGGTGTAAAGTTGGCTGTTGTATCAAATTTTGACACTCGGTTAAGACCTCTCCTGAAGGCATTAAACTGTGATGATTGGTTTGATGCTGTAGCAGTATCGGCTGAGGTTGAAGCAGAGAAACCAAATCCAACTATATTTCTTAAAGCATGTGAATTGTTGGGTGTGAAACCTGAGGATGCTGTTCATGTTGGGGATGATCGTCGAAATGACGTATGGGGTGCTAGAGATGCAGGCTGTGATGCTTGGCTTTGGGGAAGTGATGTTCACTCTTTTAAGGAGGTAGCACAGAGGATTGGGATCGATTTCTGA 831 0.4248 MAVMSGFRILTSKSRSLTSLNKWWRSASYSSTAVAATEEQDHSSAYLKDYADYRRSLYGQITHKALLVDAVGTLVIPSQPMAQIYRKIGEKYGVEYSEDEILHRYRRAYSQPWGKSRLRYVNDGRPFWQYIVSCSTGCSDSQYFEELYNYYTTDKAWHLCDPNAEVVFRTLRKSGVKLAVVSNFDTRLRPLLKALNCDDWFDAVAVSAEVEAEKPNPTIFLKACELLGVKPEDAVHVGDDRRNDVWGARDAGCDAWLWGSDVHSFKEVAQRIGIDF 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02053 276 Gene3D - 67 260 IPR023214 -
Car03g02053 276 Gene3D - 79 152 IPR044924 -
Car03g02053 276 Pfam Haloacid dehalogenase-like hydrolase 72 255 IPR041492 -
Car03g02053 276 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 64 258 - -
Car03g02053 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 63 74 IPR006439 -
Car03g02053 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 171 184 IPR006439 -
Car03g02053 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 201 217 IPR006439 -
Car03g02053 276 PRINTS Haloacid dehalogenase/epoxide hydrolase family signature 219 239 IPR006439 -
Car03g02053 276 TIGRFAM HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 155 254 IPR006439 -
Car03g02053 276 PANTHER - 38 275 - -
Car03g02053 276 SFLD Haloacid Dehalogenase 64 258 - -
Car03g02053 276 SUPERFAMILY HAD-like 64 267 IPR036412 -
Car03g02053 276 CDD HAD_dREG-2_like 164 273 - -
Car03g02053 276 TIGRFAM DREG-2: HAD hydrolase, REG-2-like, family IA 64 257 IPR011949 -
Car03g02053 276 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 38 275 - -
Car03g02053 276 TIGRFAM HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 172 252 IPR006439 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02053 Car-Chr3 66754646 66758400 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02053 - - gmx:100789672 446.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02053 03 66754646 66758400 Car03g02053 03 66754646 66758400 ECH