Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02052 ATGAGGCTTCAACTGCACCTCACGGCGGCCGTTGTGGCATTTACCGTAACTGCATGGTTATCATACAACCGCGGCTTTGGAACATATAAGGATGAGGTCATGGACGGTAATTCCGATGTTTGGCAATACGAGACGGTAATTCCGATTGAAAACGGTCTTGGACCAGAGAGTTTCGCCTTCGACCCTCACGGTGAAGGACCTTACACCGGCGTTTCCGACGGTCGAATCATCAAATGGCACCGCATGCGGAAGAGTTGGACCAATTTTGCCGCCACTTCTTCACACAGAGATAATGTTGATGAGTGTGGAGGACCACATAAGGAGCATCCAAAGAAAGAGCACATATGCGGGCGCCCACTTGGGCTTTGCTTCAACGTAGCATCAGGTGAACTTTATGTTGCTGATGCATACATGGGCCTAGTTGCAATTAAGCCCAATGGGGGCACCGCTAGAAAAGTCATATCCCATGAAGTAGAAGGGGAACCCTTGCCTTTTACAAATAGTTTGGATATTGATCAACTAACTGGAACAGTGTACTTTACCAGTAGCAGTTCTAAATACCAGAGAAGGAATTATGTGTCTGTGATTGTAAGCGGTGAAAAATCAGGGAGGTTAATAAAATACGAACCAGAAAGTGGACAAATTAGTGTTCTTCTAAAGAATCTCACATTTGCAAATGGGGTAGCACTTAGCAAAGATGGTGAATATATTCTAATAGTAGAGACAACAAACTGCAGGGTATTGAGGTATTGGTTAGAAACATCAAAAGCAGGAACATTGGAAGTCTTTGCTAATCTACCAGGTTTCCCAGACAACATAAAACGGAGTCCAAGAGGGGGATTTTGGGTTGGAATTTATTCAAGAAGACAAAAATTTATCCAATGGATTTTATCATATCCTTGGATAGGAAAAGGGTTGGTTATGCTTCCTTTGGACATAACAAACATTTATTCATATTTGGCTAAGCTGAAAGGAAGTTATGGATTGGCAATAAGGCTAAGTGAGGAGGGTGATGTGTTGGAAATTTTTGAACATAAAAGTGGAAATAGAAGTTCTATTAGTGAAGTGGAGGAAAGAGATGGTGTATTATGGGTTGGATCAGTTGATGCACCTTTTGCTGCTAAGTATAAAACTCTTGTGTCACAAGGATAA 1152 0.421 MRLQLHLTAAVVAFTVTAWLSYNRGFGTYKDEVMDGNSDVWQYETVIPIENGLGPESFAFDPHGEGPYTGVSDGRIIKWHRMRKSWTNFAATSSHRDNVDECGGPHKEHPKKEHICGRPLGLCFNVASGELYVADAYMGLVAIKPNGGTARKVISHEVEGEPLPFTNSLDIDQLTGTVYFTSSSSKYQRRNYVSVIVSGEKSGRLIKYEPESGQISVLLKNLTFANGVALSKDGEYILIVETTNCRVLRYWLETSKAGTLEVFANLPGFPDNIKRSPRGGFWVGIYSRRQKFIQWILSYPWIGKGLVMLPLDITNIYSYLAKLKGSYGLAIRLSEEGDVLEIFEHKSGNRSSISEVEERDGVLWVGSVDAPFAAKYKTLVSQG 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02052 383 Pfam Strictosidine synthase-like, N-terminal 46 79 - -
Car03g02052 383 PANTHER STRICTOSIDINE SYNTHASE-RELATED 31 373 - -
Car03g02052 383 Gene3D - 41 381 IPR011042 -
Car03g02052 383 PANTHER PROTEIN STRICTOSIDINE SYNTHASE-LIKE 2 31 373 - -
Car03g02052 383 SUPERFAMILY Calcium-dependent phosphotriesterase 43 371 - -
Car03g02052 383 Pfam Strictosidine synthase 167 253 IPR018119 GO:0009058|GO:0016844
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02052 Car-Chr3 66738784 66742344 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02052 - - mtr:MTR_7g090320 585.489
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02052 03 66738784 66742344 Car03g02052 03 66738784 66742344 ECH