Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02045 ATGGCAGAGAATGGAGGGTACAACGAAACTGAGACCATAACTCCGATGGAGATTGAGAACGGAGATGCTCTTCCACAAGTACAATCACAAGAACAAGGAAAGTGTTTGATTACCAAGATTGACGATGGTAGTGTAGAGAGTCATCGTTACTACTTGTCTCGAAGAACTACGCTTGAAATGCTTAAAGACAGAGGTTACTCTATCCCCCCTTCTGAAATCCAACTCTCTCTTCACGAATTCCGTCAAACTCATGGCCACTCTCCTGATGTTGATCGCCTCCGCTTCACCGCTACTCACACCACTAACCCCTCTAAAAGGATTTTAGTGATATTCAGTGGGCCAGGTATTGTGAAAGTGAATGTGGTCAGGAACATTGCAGGGCAAATTGTGAATAGAGACACTTTGACTGGCCTCATTTTGATTGTTCAAAGTCAAATTACTAGCCAGGCTTTGAAAGCTGTTAATCTTCTCTCTTTCAAGGTTGAAATATTTCAGATCACAGACTTGCTTGTTAATATTACAAAGCATGTATTGAAGCCAAAGCATCAGGTGCTGACTGATAAGCAGAAAAAGAATCTCCTGAAGAAGTACAATATACAAGAAAAGCAGCTTCCGCGGATGCTACAGACAGACGCAATTGCTCGATATTATGGACTTGAGAGAGGGCAGGTAGTTAAAGTTACCTACACCGGTGAAATCACCCAGATGCACGTCACATATCGATGCGTTTGGTGA 735 0.4272 MAENGGYNETETITPMEIENGDALPQVQSQEQGKCLITKIDDGSVESHRYYLSRRTTLEMLKDRGYSIPPSEIQLSLHEFRQTHGHSPDVDRLRFTATHTTNPSKRILVIFSGPGIVKVNVVRNIAGQIVNRDTLTGLILIVQSQITSQALKAVNLLSFKVEIFQITDLLVNITKHVLKPKHQVLTDKQKKNLLKKYNIQEKQLPRMLQTDAIARYYGLERGQVVKVTYTGEITQMHVTYRCVW 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02045 244 Gene3D - 169 244 IPR035913 -
Car03g02045 244 Gene3D - 41 168 IPR036710 GO:0003677|GO:0003899|GO:0006351
Car03g02045 244 PANTHER DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 25 244 IPR014381 -
Car03g02045 244 PANTHER DNA-DIRECTED RNA POLYMERASE V SUBUNIT 5A 25 244 - -
Car03g02045 244 SUPERFAMILY Eukaryotic RPB5 N-terminal domain 44 172 IPR036710 GO:0003677|GO:0003899|GO:0006351
Car03g02045 244 Pfam RNA polymerase Rpb5, N-terminal domain 46 128 IPR005571 GO:0003677|GO:0003899|GO:0006351
Car03g02045 244 SUPERFAMILY RPB5-like RNA polymerase subunit 169 244 IPR035913 -
Car03g02045 244 Pfam RNA polymerase Rpb5, C-terminal domain 171 243 IPR000783 GO:0003677|GO:0003899|GO:0006351
Car03g02045 244 PIRSF RPB5 39 244 IPR014381 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02045 Car-Chr3 66662154 66666144 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02045 K03013 - gmx:100306033 355.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02045 03 66662154 66666144 Car03g02045 03 66662154 66666144 ECH