Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car03g02041 ATGATAACTATGGATACTTTGCTCAAAACACCAAACAAGCTTCAATTTTTACACCCACTTCATGGTTATTCAGAAAAATTGAGCAATTATTCAGCCTCCTATAGTAAGTTGCAAAACCATGAGCTTAGATTTGGTTCCAAAAAACCATTTTTGAAGTGGGGTAAATGTGTTTGTGGTTTGAGGGCTAGTAGCAGTGCACTTTTGGAGCTTGTTCCTGAATTTAAGAAAGAGAATTTGGATTTTGAACTTCCTTTGTATGATTCATCAAAAGGAACTGTTGTGGATCTTGCTGTTGTTGGAGGTGGTCCTGCAGGTCTTGCAGTAGCACAGCAAGTTTCTGAAGCAGGGCTTTCAGTTTGTGCTATTGACCCAAACCCTAGATTAATTTGGCCTAATAATTATGGTGTTTGGGTGGATGAATTTGAAGCAATGGATTTACTTGATTGCCTTGACACAACTTGGTCTGGTGCTGTTGTTTATATTGATGATAAAACGAAAAAGGATCTTGATAGACCTTATGGCAGGGTTAATAGGAAGCTTTTGAAGTCAAAGATGCTACAAAAATGCATATTAAATGGTGTGAAGTTTCACCAAGCTAAAGTTATCAAGGTCATTCACGAGGATACCAAATCATTGCTGATTTGTAACGACGGTGTCACGGTTCAGGCTACTGTTGTTCTTGATGCTACTGGCTTTTCAAGATGTCTTGTTCAGTATGATAAACCGTATAACCCAGGTTACCAAGTTGCTTACGGGATTTTGGCCGAGGTTGATGAACACCCGTTTGATGTCGATAAAATGCTTTTTATGGACTGGAGAGATTCACACTTGGACAATGACAAGGAACTCAAGGAGAGAAACAGTAAAATACCTACTTTTCTGTATGCAATGCCGTTTTCATCCACCAAGATATTTCTTGAAGAAACGTCTCTTGTTGCGCGCCCTGGGTTACGTATGGATGATATACAGGATAGAATGGTTGCTAGGTTGAAACATTTGGGTATTAATGTGAAAAGCATTGAAGAAGATGAGCATTGTGTCATTCCCATGGGTGGCCCACTTCCAGTTCTCCCTCAGAGAGTTGTTGGAATTGGCGGTACAGCCGGGATGGTTCATCCTTCAACCGGGTATATGGTAGCAAGGACACTAGCTGCAGCTCCTATCATTGCTAACGCTATCGTTCGGTATCTTGGTTCTGATAGAGGTCTTTCAGGAGATGAAATATCTGCACAAGTATGGAAAGACTTATGGCCAATCCAAAGGAGGCGACAAAGGGAGTTCTTTTGTTTCGGTATGGACGTCTTACTGAAGCTTGATTTACCTGGCACAAGGAGATTTTTCGATGCATTTTTTAATCTGGAACCTCATTATTGGCATGGATTCTTATCATCAAGACTGTATCTTCCTGAGCTCTTATTTTTTGGACTATCTCTATTTTCTTATGCTTCAAATACATCTAGGGTAGAGATTATGGCAAAGGGAACTCTTCCTTTGGTAAATATGGTCAAAAACTTAATACAAGATAAAGAATAA 1533 0.3973 MITMDTLLKTPNKLQFLHPLHGYSEKLSNYSASYSKLQNHELRFGSKKPFLKWGKCVCGLRASSSALLELVPEFKKENLDFELPLYDSSKGTVVDLAVVGGGPAGLAVAQQVSEAGLSVCAIDPNPRLIWPNNYGVWVDEFEAMDLLDCLDTTWSGAVVYIDDKTKKDLDRPYGRVNRKLLKSKMLQKCILNGVKFHQAKVIKVIHEDTKSLLICNDGVTVQATVVLDATGFSRCLVQYDKPYNPGYQVAYGILAEVDEHPFDVDKMLFMDWRDSHLDNDKELKERNSKIPTFLYAMPFSSTKIFLEETSLVARPGLRMDDIQDRMVARLKHLGINVKSIEEDEHCVIPMGGPLPVLPQRVVGIGGTAGMVHPSTGYMVARTLAAAPIIANAIVRYLGSDRGLSGDEISAQVWKDLWPIQRRRQREFFCFGMDVLLKLDLPGTRRFFDAFFNLEPHYWHGFLSSRLYLPELLFFGLSLFSYASNTSRVEIMAKGTLPLVNMVKNLIQDKE 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car03g02041 510 PANTHER LYCOPENE BETA CYCLASE, CHLOROPLASTIC 9 510 - -
Car03g02041 510 SUPERFAMILY FAD/NAD(P)-binding domain 93 478 IPR036188 -
Car03g02041 510 Pfam Lycopene cyclase protein 95 487 - -
Car03g02041 510 PANTHER UBIQUINONE BIOSYNTHESIS MONOOXYGENASE COQ6, MITOCHONDRIAL 9 510 - -
Car03g02041 510 Gene3D - 92 428 IPR036188 -
Car03g02041 510 TIGRFAM carotene-cycl: lycopene cyclase family protein 95 490 IPR010108 GO:0016117|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car03g02041 Car-Chr3 66640129 66642175 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car03g02041 K06443 - gmx:100783830 927.161
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car03g02041 03 66640129 66642175 Car03g02041 03 66640129 66642175 ECH